RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 FAXDC2Q96IV6 333 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 PKMYT1Q99640 499 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 RPP25Q9BUL9 199 aaKnown RBP13.13□□□□□ -0.31
CBWD3-208ENST00000612050 NIF3L1Q9GZT8 377 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 SMYD3Q9H7B4 428 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 CRTAC1Q9NQ79 661 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
CBWD3-208ENST00000612050 ZNF638Q14966 1978 aaKnown RBP13.12□□□□□ -0.31
CBWD3-208ENST00000612050 KMT2EQ8IZD2 1858 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 TRAV19A0A0A6YYK7 116 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 KANSL1LA0AUZ9 987 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 CHADO15335 359 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-208ENST00000612050 MOSPD3O75425 235 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 RTN3O95197 1032 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-208ENST00000612050 VNN1O95497 513 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 CKMP06732 381 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 USP17L7P0C7H9 530 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 WEE1P30291 646 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 PLA2G5P39877 138 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 MAGEA9P43362 315 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 KPNA1P52294 538 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-208ENST00000612050 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
CBWD3-208ENST00000612050 STARD6P59095 220 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 AMPD2Q01433 879 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 VITQ6UXI7 678 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 TPRG1Q6ZUI0 275 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 CMTM8Q8IZV2 173 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 PDZD8Q8NEN9 1154 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 BPIFB1Q8TDL5 484 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 MYRFLQ96LU7 910 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 ZSWIM3Q96MP5 696 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 NT5C1AQ9BXI3 368 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 BCO2Q9BYV7 579 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-208ENST00000612050 FAM124BQ9H5Z6 455 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-208ENST00000612050 TRPC7Q9HCX4 862 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 TRPV5Q9NQA5 729 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
CBWD3-208ENST00000612050 KRBA1A5PL33 1030 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 BIN1O00499 593 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-208ENST00000612050 HCRTO43612 131 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 GLULP15104 373 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 PFKLP17858 780 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 FCARP24071 287 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 VIPR2P41587 438 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 GPR15P49685 360 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 CDH8P55286 799 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 SLC8A3P57103 927 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 PAK1Q13153 545 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-208ENST00000612050 SDHAF4Q5VUM1 108 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 SCARA3Q6AZY7 606 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 FOXR2Q6PJQ5 311 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 MON1AQ86VX9 555 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 NELFBQ8WX92 580 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 EEF2KMTQ96G04 330 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 PLA2G2FQ9BZM2 168 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
CBWD3-208ENST00000612050 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 DACH1Q9UI36 760 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
CBWD3-208ENST00000612050 F8VP50 259 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 ABL1P00519 1130 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 F11P03951 625 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 CCDC192P0DO97 292 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
CBWD3-208ENST00000612050 NDST1P52848 882 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
CBWD3-208ENST00000612050 MORC3Q14149 939 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 CWF19L1Q69YN2 538 aaKnown RBP13.1□□□□□ -0.31
CBWD3-208ENST00000612050 ACOT1Q86TX2 421 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 NUP93Q8N1F7 819 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 TMEM105Q8N8V8 129 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 PJA1Q8NG27 643 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 DPEP3Q9H4B8 488 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 C8orf33Q9H7E9 229 aaPredicted RBP13.1□□□□□ -0.31
CBWD3-208ENST00000612050 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 HEBP1Q9NRV9 189 aa13.1□□□□□ -0.31
CBWD3-208ENST00000612050 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms