RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CCDC195A0A1B0GUA6 201 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 RCCD1A6NED2 376 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 NOL4O94818 638 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 POU2F2P09086 479 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 HNRNPA1P09651 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 BMP1P13497 986 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 GNL1P36915 607 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 MTHFRP42898 656 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 FMO5P49326 533 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 VAV2P52735 878 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 NOP14P78316 857 aaKnown RBP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 AMPD2Q01433 879 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 ADCY1Q08828 1119 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 KCNH2Q12809 1159 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 SMAD2Q15796 467 aaKnown RBP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 NFE2Q16621 373 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 ASTE1Q2TB18 679 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CBWD6Q4V339 395 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CBWD3Q5JTY5 395 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CBWD5Q5RIA9 395 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 PPM1LQ5SGD2 360 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 ATAT1Q5SQI0 421 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 TMC5Q6UXY8 1006 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 GPR149Q86SP6 731 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 OSTM1Q86WC4 334 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 GPR161Q8N6U8 529 aaKnown RBP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 C12orf76Q8N812 135 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CEP112Q8N8E3 955 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 EHBP1Q8NDI1 1231 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 SLC7A14Q8TBB6 771 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 KBTBD7Q8WVZ9 684 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 SUSD6Q92537 303 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CCDC42Q96M95 316 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 RIPOR3Q96MK2 946 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 PRKD2Q9BZL6 878 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 SNX25Q9H3E2 840 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CYP4F11Q9HBI6 524 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 FAM53CQ9NYF3 392 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CEP72Q9P209 647 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 ARHGAP20Q9P2F6 1191 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 CDH9Q9ULB4 789 aa9.39□□□□□ -0.91
SMAD4-217ENST00000611848 SSU72P8A0A1W2PR75 194 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 MTMR11A4FU01 709 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 LRRC53A6NM62 1247 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 PRRG1O14668 218 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 ZNF263O14978 683 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 KRT86O43790 486 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 XYLBO75191 536 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 RFPL2O75678 378 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 AFPP02771 609 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 OR4Q2P0C623 313 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 KCNQ1P51787 676 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 MAPRE1Q15691 268 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 WHAMMP3Q1A5X7 153 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 SLC39A12Q504Y0 691 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 INTS6LQ5JSJ4 861 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 CCDC122Q5T0U0 273 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 SPOPLQ6IQ16 392 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 RNF19BQ6ZMZ0 732 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 RRAGAQ7L523 313 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 KIAA1328Q86T90 577 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 LRRTM3Q86VH5 581 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 OR6B3Q8NGW1 331 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 SPPL2BQ8TCT7 592 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 GOLGA1Q92805 767 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 SEMA4DQ92854 862 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 JAKMIP2Q96AA8 810 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 TMEM209Q96SK2 561 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 MRPL45Q9BRJ2 306 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 PI4K2AQ9BTU6 479 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 APOL5Q9BWW9 433 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 TSGA10Q9BZW7 698 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 FAM124BQ9H5Z6 455 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 CYP3A43Q9HB55 503 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 OGFRQ9NZT2 677 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 TRIM10Q9UDY6 481 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 GUCA1BQ9UMX6 200 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 POLIQ9UNA4 740 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 USP15Q9Y4E8 981 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 XIRP2A4UGR9 3374 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 A8MXQ7 604 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 SEC24AO95486 1093 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 LRG1P02750 347 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 PLEKP08567 350 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 IL9P15248 144 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 ACAT1P24752 427 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 LMO2P25791 158 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 EIF4A3P38919 411 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 TUFMP49411 452 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 CLCN6P51797 869 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 KIF11P52732 1056 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 DUSP4Q13115 394 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 PLD1Q13393 1074 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 CBX2Q14781 532 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 SPA17Q15506 151 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 PAPD7Q5XG87 772 aaKnown RBP9.38□□□□□ -0.91
SMAD4-217ENST00000611848 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
SMAD4-217ENST00000611848 DPY19L2P1Q6NXN4 242 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms