RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 LPXNO60711 386 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PIGRP01833 764 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 GSTA1P08263 222 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 RAP1GAPP47736 663 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 SESN2P58004 480 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 ZNF200P98182 395 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 PKN2Q16513 984 aaKnown RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 KIZQ2M2Z5 673 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 POTEAQ6S8J7 498 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PLPPR4Q7Z2D5 763 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PPP4R1Q8TF05 950 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 PPP1R12CQ9BZL4 782 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 ZFATQ9P243 1243 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 KLHL8Q9P2G9 620 aaPredicted RBP6.67□□□□□ -1.34
SNX13-213ENST00000611725 ZFP69BQ9UJL9 534 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 NENFQ9UMX5 172 aa6.67□□□□□ -1.34
SNX13-213ENST00000611725 hCG_1818297A0A087WSY0 165 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 MSCO60682 206 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 SNRPAP09012 282 aaKnown RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 GCLCP48506 637 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 MAP3K10Q02779 954 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 TCEAL1Q15170 157 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 EFHC2Q5JST6 749 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 MAML1Q92585 1016 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ACO2Q99798 780 aaKnown RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 TUBB6Q9BUF5 446 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 C10orf88Q9H8K7 445 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 CTNNAL1Q9UBT7 734 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 BARX2Q9UMQ3 279 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 USP18Q9UMW8 372 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 CCL15-CCL14A0A0B4J2E2 113 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ALOX15BO15296 676 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 NFICP08651 508 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 CCL15Q16663 113 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ANKRD20A8PQ5CZ79 823 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 LVRNQ6Q4G3 990 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 NDUFAF2Q8N183 169 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 GTF3C2Q8WUA4 911 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 FAM172AQ8WUF8 416 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 KAT2BQ92831 832 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 SLCO2A1Q92959 643 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 GPR88Q9GZN0 384 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 MAF1Q9H063 256 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ECT2Q9H8V3 914 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 IQCA1LA6NCM1 817 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 SIGLEC16A6NMB1 481 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 GJB1P08034 283 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 RPSAP08865 295 aaKnown RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 ABHD2P08910 425 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 GHRP10912 638 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ZFXP17010 805 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 ADRA1DP25100 572 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 NDST1P52848 882 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 SLC12A2P55011 1212 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 SESN3P58005 492 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 PID1Q7Z2X4 250 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 SDCCAG8Q86SQ7 713 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 PRUNE1Q86TP1 453 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 SLC26A11Q86WA9 606 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 FNIP1Q8TF40 1166 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ZNF516Q92618 1163 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 DPP3Q9NY33 737 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 BTBD7Q9P203 1132 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ARHGAP42A6NI28 874 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 IGF2BP3O00425 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
SNX13-213ENST00000611725 LRCH4O75427 683 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 LGALS2P05162 132 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ELK3P41970 407 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 CELF3Q5SZQ8 465 aaKnown RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 TREML2Q5T2D2 321 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 DENND1BQ6P3S1 775 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 JOSD2Q8TAC2 188 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 TFAP2BQ92481 460 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 GPR20Q99678 358 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 OSBPL7Q9BZF2 842 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ACSS3Q9H6R3 686 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 B4GALT4O60513 344 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ACO1P21399 889 aaKnown RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 IFRD2Q12894 506 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 NUDCD3Q8IVD9 361 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 ZBED3Q96IU2 234 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 MAGEB18Q96M61 343 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.66□□□□□ -1.34
SNX13-213ENST00000611725 PHTF1Q9UMS5 762 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 STYXL1Q9Y6J8 313 aa6.66□□□□□ -1.34
SNX13-213ENST00000611725 C5orf60A6NFR6 353 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 LACTBL1A8MY62 500 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 E5RJQ4 531 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 VTNP04004 478 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 KDELR1P24390 212 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 RPL22P35268 128 aaKnown RBP6.65□□□□□ -1.34
SNX13-213ENST00000611725 PDK2Q15119 407 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 TRABD2AQ86V40 505 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 FAM131BQ86XD5 332 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 GABPB2Q8TAK5 448 aaPredicted RBP6.65□□□□□ -1.34
SNX13-213ENST00000611725 CKAP2Q8WWK9 683 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 GEMIN8Q9NWZ8 242 aaKnown RBP6.65□□□□□ -1.34
SNX13-213ENST00000611725 POLIQ9UNA4 740 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 EFR3BQ9Y2G0 817 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 SPDYE5A6NIY4 337 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms