RNA–Protein interactions for RNA: ENST00000610738.5

COLCA2-204, Transcript of colorectal cancer associated 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLCA2, Length 975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-204ENST00000610738 EBF3Q9H4W6 596 aa17.5■□□□□ 0.39
COLCA2-204ENST00000610738 HMGXB4Q9UGU5 601 aa17.5■□□□□ 0.39
COLCA2-204ENST00000610738 R3HCC1Q9Y3T6 440 aaKnown RBP17.5■□□□□ 0.39
COLCA2-204ENST00000610738 GPR179Q6PRD1 2367 aa17.5■□□□□ 0.39
COLCA2-204ENST00000610738 PATJQ8NI35 1801 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 FAM237AA0A1B0GTK4 181 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 F8VP50 259 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 MAN2B1O00754 1011 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 PHACTR2O75167 634 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 CLSTN1O94985 981 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 C4BPAP04003 597 aaKnown RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 TDGF1P13385 188 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 GNL1P36915 607 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 RPS9P46781 194 aaKnown RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 TNNC1P63316 161 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 ZXDBP98169 803 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 FOXK2Q01167 660 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 TRPC3Q13507 836 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 CEP135Q66GS9 1140 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 ZC3H14Q6PJT7 736 aaKnown RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 KRBA2Q6ZNG9 492 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 DPH6Q7L8W6 267 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 MON1AQ86VX9 555 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 MRPS31Q92665 395 aaKnown RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 ERCC4Q92889 916 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 E2F7Q96AV8 911 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 B3GNT5Q9BYG0 378 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 SNX25Q9H3E2 840 aa17.49■□□□□ 0.39
COLCA2-204ENST00000610738 PRMT8Q9NR22 394 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 MAGEC2Q9UBF1 373 aaPredicted RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 MRPS17Q9Y2R5 130 aaKnown RBP17.49■□□□□ 0.39
COLCA2-204ENST00000610738 ANTXRLA6NF34 631 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
COLCA2-204ENST00000610738 TRIM49P0CI25 452 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 TRIM49CP0CI26 452 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 PTPN1P18031 435 aaKnown RBP17.48■□□□□ 0.39
COLCA2-204ENST00000610738 AVPR1AP37288 418 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 GRIK1P39086 918 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 IFRD2Q12894 506 aaPredicted RBP17.48■□□□□ 0.39
COLCA2-204ENST00000610738 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 CELF5Q8N6W0 485 aaKnown RBP17.48■□□□□ 0.39
COLCA2-204ENST00000610738 SUMF1Q8NBK3 374 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 MYCBPAPQ8TBZ2 947 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 SPATA18Q8TC71 538 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 MYRFLQ96LU7 910 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 NELL2Q99435 816 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 FBRSL1Q9HCM7 1045 aaKnown RBP17.48■□□□□ 0.39
COLCA2-204ENST00000610738 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 OBP2AQ9NY56 170 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 GCNT4Q9P109 453 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 WNT6Q9Y6F9 365 aa17.48■□□□□ 0.39
COLCA2-204ENST00000610738 FRYLO94915 3013 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 A8MXQ7 604 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 TACC1O75410 805 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 ZNF202O95125 648 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 MAGEA11P43364 429 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 SNRPFP62306 86 aaKnown RBP17.47■□□□□ 0.39
COLCA2-204ENST00000610738 SRSF5Q13243 272 aaKnown RBP17.47■□□□□ 0.39
COLCA2-204ENST00000610738 NCOA4Q13772 614 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 ZNF699Q32M78 642 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 C4orf50Q6ZRC1 276 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 TRMT2BQ96GJ1 504 aaKnown RBP17.47■□□□□ 0.39
COLCA2-204ENST00000610738 FUBP3Q96I24 572 aaKnown RBP eCLIP17.47■□□□□ 0.39
COLCA2-204ENST00000610738 FBXO4Q9UKT5 387 aa17.47■□□□□ 0.39
COLCA2-204ENST00000610738 NUP210Q8TEM1 1887 aaPredicted RBP17.46■□□□□ 0.39
COLCA2-204ENST00000610738 NCAM2O15394 837 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 AKAP3O75969 853 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 RHOBTB3O94955 611 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 WEE1P30291 646 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 CLDN10P78369 228 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 PNOCQ13519 176 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 ZNF77Q15935 545 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 LPAL2Q16609 132 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 ZNF528Q3MIS6 628 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 PAQR9Q6ZVX9 377 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 SLC9A9Q8IVB4 645 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 B3GALNT2Q8NCR0 500 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 KCNK16Q96T55 309 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 LINC00597Q9H2U6 94 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 MMRN2Q9H8L6 949 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 CGNQ9P2M7 1197 aaKnown RBP17.46■□□□□ 0.39
COLCA2-204ENST00000610738 USP25Q9UHP3 1055 aa17.46■□□□□ 0.39
COLCA2-204ENST00000610738 OBSL1O75147 1896 aa17.46■□□□□ 0.38
COLCA2-204ENST00000610738 A0A1W2PQ27 194 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 A0A1W2PQ64 194 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 A0A1W2PQD8 194 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 PDXKO00764 312 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 CKMP06732 381 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 CCDC130P13994 396 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 PPP3CAQ08209 521 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 USP4Q13107 963 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 PSMD2Q13200 908 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 RUNX3Q13761 415 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 MTF1Q14872 753 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 ITPRIPL2Q3MIP1 535 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 FSTL4Q6MZW2 842 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 SV2AQ7L0J3 742 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 ACOT1Q86TX2 421 aa17.45■□□□□ 0.38
COLCA2-204ENST00000610738 ZBTB44Q8NCP5 570 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms