RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 ZNF518BQ9C0D4 1074 aa10.2□□□□□ -0.78
LINC00649-212ENST00000601471 NUP62CLQ9H1M0 184 aa10.2□□□□□ -0.78
LINC00649-212ENST00000601471 MAGEC2Q9UBF1 373 aaPredicted RBP10.2□□□□□ -0.78
LINC00649-212ENST00000601471 WNT16Q9UBV4 365 aa10.2□□□□□ -0.78
LINC00649-212ENST00000601471 HELZP42694 1942 aaKnown RBP10.19□□□□□ -0.78
LINC00649-212ENST00000601471 SLC38A8A6NNN8 435 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 ARNTLO00327 626 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 TRIM66O15016 1216 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 P4HA2O15460 535 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 BDNFP23560 247 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 FMO5P49326 533 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 NDST1P52848 882 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 CYP27A1Q02318 531 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 FCHO2Q0JRZ9 810 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 DPCR1Q3MIW9 517 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 TANGO2Q6ICL3 276 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 FAM35AQ86V20 835 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 IRF2BP1Q8IU81 584 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 FBXL6Q8N531 539 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 TTC39CQ8N584 583 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 UBR7Q8N806 425 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 STKLD1Q8NE28 680 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 LMO3Q8TAP4 145 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 ZSCAN18Q8TBC5 510 aaPredicted RBP10.19□□□□□ -0.78
LINC00649-212ENST00000601471 GIPC2Q8TF65 315 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 RSPRY1Q96DX4 576 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 ARID3AQ99856 593 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 KXD1Q9BQD3 176 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 TASP1Q9H6P5 420 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 MMRN2Q9H8L6 949 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 CSNK1G1Q9HCP0 422 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 TRPV5Q9NQA5 729 aa10.19□□□□□ -0.78
LINC00649-212ENST00000601471 UXTQ9UBK9 157 aaPredicted RBP10.19□□□□□ -0.78
LINC00649-212ENST00000601471 COL4A3Q01955 1670 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 CACNA1HO95180 2353 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 FAM92AA1XBS5 289 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 KRBA1A5PL33 1030 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 F8VP50 259 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 TNFRSF10BO14763 440 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 PDGFBP01127 241 aaPredicted RBP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 NPR3P17342 541 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 DDX6P26196 483 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 ERCC5P28715 1186 aaPredicted RBP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 STX17P56962 302 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 USP46P62068 366 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 CT47A1Q5JQC4 288 aaPredicted RBP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 SDHAF4Q5VUM1 108 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 TCERG1LQ5VWI1 586 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 CWF19L1Q69YN2 538 aaKnown RBP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 VITQ6UXI7 678 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 DENND5BQ6ZUT9 1274 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 ACOT1Q86TX2 421 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 CCDC150Q8NCX0 1101 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 FAM200AQ8TCP9 573 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 DEPDC1BQ8WUY9 529 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 DNASE1L2Q92874 299 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 E2F7Q96AV8 911 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 SMARCD1Q96GM5 515 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 DDX23Q9BUQ8 820 aaKnown RBP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 SRRTQ9BXP5 876 aaKnown RBP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 SLC46A2Q9BY10 475 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 PLA2G2FQ9BZM2 168 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 ATXN3LQ9H3M9 355 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 ZFP14Q9HCL3 533 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 OBP2AQ9NY56 170 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 IL37Q9NZH6 218 aa10.18□□□□□ -0.78
LINC00649-212ENST00000601471 ARIH1Q9Y4X5 557 aaPredicted RBP10.18□□□□□ -0.78
LINC00649-212ENST00000601471 TICRRQ7Z2Z1 1910 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ZNF292O60281 2723 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ATP8B3O60423 1300 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 SHISA7A6NL88 538 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 GOLGA6L22H0YM25 854 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 CLDN5O00501 218 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 PRAMEF12O95522 483 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 FGFR1OPO95684 399 aaKnown RBP10.17□□□□□ -0.78
LINC00649-212ENST00000601471 OLFM2O95897 454 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 PFKLP17858 780 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 PSMC3P17980 439 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 GRIK1P39086 918 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 VIPR2P41587 438 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 GPC5P78333 572 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 CYP4F8P98187 520 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 PFKPQ01813 784 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ORC1Q13415 861 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 CUL2Q13617 745 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ZNF268Q14587 947 aaPredicted RBP10.17□□□□□ -0.78
LINC00649-212ENST00000601471 CCDC40Q4G0X9 1142 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ARHGAP15Q53QZ3 475 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 GPR158Q5T848 1215 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 MON1AQ86VX9 555 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ARID3BQ8IVW6 561 aaPredicted RBP10.17□□□□□ -0.78
LINC00649-212ENST00000601471 MFSD6LQ8IWD5 586 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 SCN4BQ8IWT1 228 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 CMTM8Q8IZV2 173 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 C12orf29Q8N999 325 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 SLC4A11Q8NBS3 891 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ZMIZ2Q8NF64 920 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 ST13P5Q8NFI4 369 aaPredicted RBP10.17□□□□□ -0.78
LINC00649-212ENST00000601471 SLC2A14Q8TDB8 520 aa10.17□□□□□ -0.78
LINC00649-212ENST00000601471 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms