RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 KCNK16Q96T55 309 aa24.29■■□□□ 1.48
IRF3-227ENST00000600911 EIF3CQ99613 913 aaKnown RBP24.29■■□□□ 1.48
IRF3-227ENST00000600911 MED10Q9BTT4 135 aa24.29■■□□□ 1.48
IRF3-227ENST00000600911 C11orf84Q9BUA3 381 aaPredicted RBP24.29■■□□□ 1.48
IRF3-227ENST00000600911 MRPL17Q9NRX2 175 aaKnown RBP24.29■■□□□ 1.48
IRF3-227ENST00000600911 KRT82Q9NSB4 513 aa24.29■■□□□ 1.48
IRF3-227ENST00000600911 ABI2Q9NYB9 513 aaPredicted RBP24.29■■□□□ 1.48
IRF3-227ENST00000600911 MED7O43513 233 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 SOAT2O75908 522 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 CXCL14O95715 111 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 ABL1P00519 1130 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 SMAD3P84022 425 aaKnown RBP24.28■■□□□ 1.48
IRF3-227ENST00000600911 GPR17Q13304 367 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 CCDC122Q5T0U0 273 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 ALKBH5Q6P6C2 394 aaKnown RBP24.28■■□□□ 1.48
IRF3-227ENST00000600911 C17orf53Q8N3J3 647 aaPredicted RBP24.28■■□□□ 1.48
IRF3-227ENST00000600911 ANKRD52Q8NB46 1076 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 SAMD11Q96NU1 681 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 SLC28A3Q9HAS3 691 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 RXFP1Q9HBX9 757 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 TLR9Q9NR96 1032 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 ADGRG1Q9Y653 693 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 GREB1Q4ZG55 1949 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 REV3LO60673 3130 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.28■■□□□ 1.48
IRF3-227ENST00000600911 PIK3R2O00459 728 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 CA8P35219 290 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 CYLC1P35663 651 aaPredicted RBP24.28■■□□□ 1.48
IRF3-227ENST00000600911 RGS7P49802 495 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 PMF1Q6P1K2 205 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 LHX5Q9H2C1 402 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 PDCL3Q9H2J4 239 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 ENTPD7Q9NQZ7 604 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 SLC27A5Q9Y2P5 690 aa24.28■■□□□ 1.48
IRF3-227ENST00000600911 MAP3K7CLP57077 242 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 CENPCQ03188 943 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 PTP4A2Q12974 167 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 PTPN20Q4JDL3 420 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 SDHAF4Q5VUM1 108 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 PHLDB2Q86SQ0 1253 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 DCP1BQ8IZD4 617 aaKnown RBP24.27■■□□□ 1.48
IRF3-227ENST00000600911 SLC35F5Q8WV83 523 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 CPXM1Q96SM3 734 aa24.27■■□□□ 1.48
IRF3-227ENST00000600911 CHORDC1Q9UHD1 332 aaPredicted RBP24.27■■□□□ 1.48
IRF3-227ENST00000600911 C2orf71A6NGG8 1288 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 USP27XA6NNY8 438 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 LPXNO60711 386 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 AP1G2O75843 785 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 SEC24AO95486 1093 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 ACAD10Q6JQN1 1059 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 GPRIN1Q7Z2K8 1008 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 KLHL5Q96PQ7 755 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 DUSP16Q9BY84 665 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 ISCUQ9H1K1 167 aa24.26■■□□□ 1.47
IRF3-227ENST00000600911 HHLA1C9JL84 531 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 SOX1O00570 391 aaPredicted RBP24.25■■□□□ 1.47
IRF3-227ENST00000600911 ATMINO43313 823 aaPredicted RBP24.25■■□□□ 1.47
IRF3-227ENST00000600911 FTLP02792 175 aaPredicted RBP24.25■■□□□ 1.47
IRF3-227ENST00000600911 ANXA13P27216 316 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 UBE3AQ05086 875 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 STILQ15468 1287 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 ADGRD2Q7Z7M1 963 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 SPATA2LQ8IUW3 424 aaPredicted RBP24.25■■□□□ 1.47
IRF3-227ENST00000600911 MRPL43Q8N983 215 aaKnown RBP24.25■■□□□ 1.47
IRF3-227ENST00000600911 FNIP2Q9P278 1114 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 PCDHA13Q9Y5I0 950 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 SZT2Q5T011 3432 aa24.25■■□□□ 1.47
IRF3-227ENST00000600911 MTCL1Q9Y4B5 1905 aaKnown RBP24.25■■□□□ 1.47
IRF3-227ENST00000600911 ABLIM3O94929 683 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 SPATA31D3P0C874 917 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 NPR3P17342 541 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 BCAT1P54687 386 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 ADCY1Q08828 1119 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 BST2Q10589 180 aaKnown RBP24.24■■□□□ 1.47
IRF3-227ENST00000600911 PDCLQ13371 301 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 MMS22LQ6ZRQ5 1243 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 SPATA31D4Q6ZUB0 917 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 MON1BQ7L1V2 547 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 VPS36Q86VN1 386 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 ARHGEF26Q96DR7 871 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 C11orf70Q9BRQ4 267 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 LACRTQ9GZZ8 138 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 HESX1Q9UBX0 185 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 TRIM10Q9UDY6 481 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 PCDHB5Q9Y5E4 795 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 IRAK3Q9Y616 596 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 ZNF638Q14966 1978 aaKnown RBP24.24■■□□□ 1.47
IRF3-227ENST00000600911 RTN2O75298 545 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 LSM8O95777 96 aaKnown RBP24.24■■□□□ 1.47
IRF3-227ENST00000600911 ERBB2P04626 1255 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 FAM200BP0CF97 657 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 GZMAP12544 262 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 GALCP54803 685 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 DUSP4Q13115 394 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 RAB33AQ14088 237 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 CFAP221Q4G0U5 840 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 CYP4A22Q5TCH4 519 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 TRIM72Q6ZMU5 477 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 PIGZQ86VD9 579 aa24.24■■□□□ 1.47
IRF3-227ENST00000600911 GPR65Q8IYL9 337 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms