RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MORC3Q14149 939 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 FAM122AQ96E09 287 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 DHTKD1Q96HY7 919 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 SHDQ96IW2 340 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 CEP295NLQ96MC4 621 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 GCNAQ96QF7 691 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 BCO2Q9BYV7 579 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 ZNF518BQ9C0D4 1074 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 MMRN2Q9H8L6 949 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 BRD9Q9H8M2 597 aa19.7■□□□□ 0.74
SHKBP1-202ENST00000593764 GREB1Q4ZG55 1949 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 ARNTLO00327 626 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 NOP14P78316 857 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 NHLH1Q02575 133 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 FCHO2Q0JRZ9 810 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 KRT39Q6A163 491 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 TXNDC8Q6A555 127 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 PAQR9Q6ZVX9 377 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 CMTM8Q8IZV2 173 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 MAB21L3Q8N8X9 362 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 SEMA4DQ92854 862 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 DNASE1L2Q92874 299 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 C8orf48Q96LL4 319 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 FOXQ1Q9C009 403 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 SMG9Q9H0W8 520 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 TRPV5Q9NQA5 729 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 HEBP1Q9NRV9 189 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 OBP2AQ9NY56 170 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 DLGAP2Q9P1A6 1054 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 UXTQ9UBK9 157 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 HMGXB4Q9UGU5 601 aa19.69■□□□□ 0.74
SHKBP1-202ENST00000593764 KANSL1LA0AUZ9 987 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 F8VP50 259 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 BIN1O00499 593 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 PSMA7O14818 248 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 SLC16A3O15427 465 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 CLSTN1O94985 981 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 CD72P21854 359 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 DDX6P26196 483 aaKnown RBP eCLIP19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 NDST1P52848 882 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 USP46P62068 366 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 STIM1Q13586 685 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 ACOT1Q86TX2 421 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 MON1AQ86VX9 555 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 CRYBG2Q8N1P7 616 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 PJA1Q8NG27 643 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 IRF7Q92985 503 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 TNIP3Q96KP6 325 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 DUSP9Q99956 384 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 ELOVL4Q9GZR5 314 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 ZMYM5Q9UJ78 669 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 SIT1Q9Y3P8 196 aa19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 MTF2Q9Y483 593 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-202ENST00000593764 OBSL1O75147 1896 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 NUP210Q8TEM1 1887 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 SOBPA7XYQ1 873 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 ZNF263O14978 683 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 TRIM66O15016 1216 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 CHADO15335 359 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 DCNP07585 359 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 GLULP15104 373 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 PPP1R2P41236 205 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 PTPN5P54829 565 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 ORC1Q13415 861 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 TTI2Q6NXR4 508 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 DENND5BQ6ZUT9 1274 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 UNC93AQ86WB7 457 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 CCDC105Q8IYK2 499 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 MRPS31Q92665 395 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 TTLL2Q9BWV7 592 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 IMPG2Q9BZV3 1241 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 CCL26Q9Y258 94 aa19.67■□□□□ 0.74
SHKBP1-202ENST00000593764 DPYSL4O14531 572 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 RFX1P22670 979 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 MXI1P50539 228 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 INCA1Q0VD86 236 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 CBWD6Q4V339 395 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 CBWD3Q5JTY5 395 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 CBWD5Q5RIA9 395 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 KLHL10Q6JEL2 608 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 FOXR2Q6PJQ5 311 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 TPRG1Q6ZUI0 275 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 FUKQ8N0W3 1084 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 DTWD2Q8NBA8 298 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 FBXL13Q8NEE6 735 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 WHAMMQ8TF30 809 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 NELFBQ8WX92 580 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 USP13Q92995 863 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 TWNKQ96RR1 684 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 SLC22A12Q96S37 553 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 NIF3L1Q9GZT8 377 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 CYP3A43Q9HB55 503 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 RAB20Q9NX57 234 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 KIAA1468Q9P260 1216 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 VPS13AQ96RL7 3174 aa19.66■□□□□ 0.74
SHKBP1-202ENST00000593764 COL4A2P08572 1712 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 ANAPC1Q9H1A4 1944 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 STX10O60499 249 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 ANXA13P27216 316 aa19.65■□□□□ 0.74
SHKBP1-202ENST00000593764 AVPR1AP37288 418 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms