RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 NME7Q9Y5B8 376 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 VPS13AQ96RL7 3174 aa14.86□□□□□ -0.03
CLIP3-205ENST00000592017 COL4A3Q01955 1670 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 FAM170BA6NMN3 283 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 HEPACAM2A8MVW5 462 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 STX10O60499 249 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 ASS1P00966 412 aaKnown RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 HMGA1P17096 107 aaKnown RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 PSMC3P17980 439 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 GDI1P31150 447 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 NBL1P41271 181 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 NOP14P78316 857 aaKnown RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 MAPRE1Q15691 268 aaKnown RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 DDR2Q16832 855 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 KRT39Q6A163 491 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 TTI2Q6NXR4 508 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 TPRG1Q6ZUI0 275 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 FRMD5Q7Z6J6 570 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 ARID3BQ8IVW6 561 aaPredicted RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 MFSD6LQ8IWD5 586 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 SCN4BQ8IWT1 228 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 TAF4BQ92750 862 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 CEP63Q96MT8 703 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 DUSP9Q99956 384 aaKnown RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 BRD9Q9H8M2 597 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 APOBEC3GQ9HC16 384 aaKnown RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 ABCB6Q9NP58 842 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 LTB4R2Q9NPC1 389 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 HEBP1Q9NRV9 189 aa14.85□□□□□ -0.03
CLIP3-205ENST00000592017 MAGEC2Q9UBF1 373 aaPredicted RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 ARMCX3Q9UH62 379 aaPredicted RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 MAGED2Q9UNF1 606 aaPredicted RBP14.85□□□□□ -0.03
CLIP3-205ENST00000592017 RIF1Q5UIP0 2472 aaKnown RBP14.84□□□□□ -0.03
CLIP3-205ENST00000592017 ARNTLO00327 626 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 BDNFP23560 247 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 TARSP26639 723 aaKnown RBP14.84□□□□□ -0.03
CLIP3-205ENST00000592017 GTF2H1P32780 548 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 ASPAP45381 313 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 RPL10AP62906 217 aaKnown RBP14.84□□□□□ -0.03
CLIP3-205ENST00000592017 ORC1Q13415 861 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 UBXN2BQ14CS0 331 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 CFAP221Q4G0U5 840 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 GPR158Q5T848 1215 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 FAM171BQ6P995 826 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 TMEM150AQ86TG1 271 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 B3GALNT2Q8NCR0 500 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 MYCBPAPQ8TBZ2 947 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 DNASE1L2Q92874 299 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 PCED1BQ96HM7 432 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 FUBP3Q96I24 572 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLIP3-205ENST00000592017 GCNAQ96QF7 691 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 WDR87Q6ZQQ6 2873 aa14.84□□□□□ -0.03
CLIP3-205ENST00000592017 PTPRZ1P23471 2315 aaPredicted RBP14.83□□□□□ -0.03
CLIP3-205ENST00000592017 F5P12259 2224 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 GFRA3O60609 400 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 FGF19O95750 216 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 FAM163BP0C2L3 166 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 PTPN1P18031 435 aaKnown RBP14.83□□□□□ -0.04
CLIP3-205ENST00000592017 CD58P19256 250 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 CYP4F8P98187 520 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 FZD5Q13467 585 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 CBWD6Q4V339 395 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 CBWD3Q5JTY5 395 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 CBWD5Q5RIA9 395 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 ASCL5Q7RTU5 278 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 FILIP1Q7Z7B0 1213 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 C1orf210Q8IVY1 113 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 MAML2Q8IZL2 1156 aaPredicted RBP14.83□□□□□ -0.04
CLIP3-205ENST00000592017 ZNF687Q8N1G0 1237 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 FBXL13Q8NEE6 735 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 DEPDC1BQ8WUY9 529 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 SEMA4DQ92854 862 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 IRF7Q92985 503 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 SLC46A2Q9BY10 475 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 OSBPL6Q9BZF3 934 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 NIF3L1Q9GZT8 377 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 TASP1Q9H6P5 420 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 METTL14Q9HCE5 456 aaKnown RBP14.83□□□□□ -0.04
CLIP3-205ENST00000592017 TRPV5Q9NQA5 729 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.04
CLIP3-205ENST00000592017 CLDN5O00501 218 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 ZNF263O14978 683 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 PRAMEF12O95522 483 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 F11P03951 625 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 CSH1P0DML2 217 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 CSH2P0DML3 217 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 ANXA13P27216 316 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 CDC25CP30307 473 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 GRIK1P39086 918 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 NDST1P52848 882 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 NLRP12P59046 1061 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 FCHO2Q0JRZ9 810 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 ARHGAP15Q53QZ3 475 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 ZNF852Q6ZMS4 543 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 ACOT1Q86TX2 421 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 SLC35C1Q96A29 364 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 E2F7Q96AV8 911 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 CLDN23Q96B33 292 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 TNIP3Q96KP6 325 aa14.82□□□□□ -0.04
CLIP3-205ENST00000592017 NELL2Q99435 816 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms