RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 HFE2Q6ZVN8 426 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 GAREM2Q75VX8 874 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 TMC8Q8IU68 726 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 GPIHBP1Q8IV16 184 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 SIX5Q8N196 739 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 STKLD1Q8NE28 680 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 TTC16Q8NEE8 873 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 SEMA4DQ92854 862 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 SLC35C1Q96A29 364 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ELSPBP1Q96BH3 223 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 HEXIM2Q96MH2 286 aaKnown RBP10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ZSWIM3Q96MP5 696 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 RPP25Q9BUL9 199 aaKnown RBP10.71□□□□□ -0.69
BRCA1-227ENST00000591849 TRMT61BQ9BVS5 477 aaKnown RBP10.71□□□□□ -0.69
BRCA1-227ENST00000591849 LRRC3Q9BY71 257 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 B3GNT5Q9BYG0 378 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ZNF518BQ9C0D4 1074 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 TASP1Q9H6P5 420 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 BRD9Q9H8M2 597 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 APOBEC3GQ9HC16 384 aaKnown RBP10.71□□□□□ -0.69
BRCA1-227ENST00000591849 TRPC7Q9HCX4 862 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 TRPM5Q9NZQ8 1165 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 WNT16Q9UBV4 365 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 ZMYM5Q9UJ78 669 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 CA14Q9ULX7 337 aa10.71□□□□□ -0.69
BRCA1-227ENST00000591849 MTCL1Q9Y4B5 1905 aaKnown RBP10.7□□□□□ -0.7
BRCA1-227ENST00000591849 F8VP50 259 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 MOSPD3O75425 235 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 AP1G2O75843 785 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 NOL4O94818 638 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 AFPP02771 609 aaKnown RBP10.7□□□□□ -0.7
BRCA1-227ENST00000591849 DDX6P26196 483 aaKnown RBP eCLIP10.7□□□□□ -0.7
BRCA1-227ENST00000591849 ADORA2BP29275 332 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 VIPR2P41587 438 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 KCNH2Q12809 1159 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 GRM2Q14416 872 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 ZNF394Q53GI3 561 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 DENND5BQ6ZUT9 1274 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 BMP8AQ7Z5Y6 402 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 FAM35AQ86V20 835 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 ARID3BQ8IVW6 561 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-227ENST00000591849 FAM114A1Q8IWE2 563 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 CRYBG2Q8N1P7 616 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 FBXL6Q8N531 539 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 MAB21L3Q8N8X9 362 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 TATDN2Q93075 761 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 SMARCD1Q96GM5 515 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 FAXDC2Q96IV6 333 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 SHDQ96IW2 340 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 SPATA17Q96L03 361 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 C8orf48Q96LL4 319 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 CEP295NLQ96MC4 621 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 ASB16Q96NS5 453 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 NT5C1BQ96P26 610 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 PRRX2Q99811 253 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 BCO2Q9BYV7 579 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 PLA2G2FQ9BZM2 168 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 FAM49BQ9NUQ9 324 aa10.7□□□□□ -0.7
BRCA1-227ENST00000591849 THG1LQ9NWX6 298 aaKnown RBP10.7□□□□□ -0.7
BRCA1-227ENST00000591849 HEPACAM2A8MVW5 462 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 PES1O00541 588 aaKnown RBP10.69□□□□□ -0.7
BRCA1-227ENST00000591849 ZNF263O14978 683 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 P4HA2O15460 535 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 RTN3O95197 1032 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-227ENST00000591849 F11P03951 625 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 FAM200BP0CF97 657 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 CCDC130P13994 396 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 HMGA1P17096 107 aaKnown RBP10.69□□□□□ -0.7
BRCA1-227ENST00000591849 PSMC3P17980 439 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 TBXAS1P24557 533 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-227ENST00000591849 GDI1P31150 447 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 SLC8A3P57103 927 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 MCCD1P59942 119 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-227ENST00000591849 CUL2Q13617 745 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 SLC44A4Q53GD3 710 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 STXBP5Q5T5C0 1151 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 TXNDC8Q6A555 127 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 NUP93Q8N1F7 819 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 PPM1KQ8N3J5 372 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 GPT2Q8TD30 523 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 SLC2A14Q8TDB8 520 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 DEPDC1BQ8WUY9 529 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 JAKMIP2Q96AA8 810 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 CYFIP2Q96F07 1278 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 ASIC4Q96FT7 647 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 TRMT2BQ96GJ1 504 aaKnown RBP10.69□□□□□ -0.7
BRCA1-227ENST00000591849 SLITRK1Q96PX8 696 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 DMAP1Q9NPF5 467 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-227ENST00000591849 SLC2A4RGQ9NR83 387 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 KRT82Q9NSB4 513 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 CISHQ9NSE2 258 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 COQ4Q9Y3A0 265 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 NME7Q9Y5B8 376 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
BRCA1-227ENST00000591849 TRAV19A0A0A6YYK7 116 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-227ENST00000591849 LRRN2O75325 713 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CILPO75339 1184 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 USP17L7P0C7H9 530 aa10.68□□□□□ -0.7
BRCA1-227ENST00000591849 CD19P15391 556 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms