RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 KRBA1A5PL33 1030 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 F8VP50 259 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 RIOK3O14730 519 aaKnown RBP9.78□□□□□ -0.84
DNMT1-223ENST00000591239 TRIM66O15016 1216 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 NOL4O94818 638 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 F11P03951 625 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 ANXA13P27216 316 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 VIPR2P41587 438 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 CACNA2D1P54289 1103 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 CYP4F8P98187 520 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 INCA1Q0VD86 236 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 ORC1Q13415 861 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 CCDC40Q4G0X9 1142 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 WDR44Q5JSH3 913 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 UNC93AQ86WB7 457 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 ARID3BQ8IVW6 561 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-223ENST00000591239 SIX5Q8N196 739 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 CRYBG2Q8N1P7 616 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 MLKLQ8NB16 471 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 FAXDC2Q96IV6 333 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 C8orf48Q96LL4 319 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 MYRFLQ96LU7 910 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 CEP295NLQ96MC4 621 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 SRRTQ9BXP5 876 aaKnown RBP9.78□□□□□ -0.84
DNMT1-223ENST00000591239 ZNF518BQ9C0D4 1074 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 ELOVL4Q9GZR5 314 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 NUP62CLQ9H1M0 184 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 MFSD1Q9H3U5 465 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 TASP1Q9H6P5 420 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 TMEM30AQ9NV96 361 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 HMGXB4Q9UGU5 601 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 RAPGEFL1Q9UHV5 662 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 RWDD2AQ9UIY3 292 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 CA14Q9ULX7 337 aa9.78□□□□□ -0.84
DNMT1-223ENST00000591239 VPS13AQ96RL7 3174 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 HEPACAM2A8MVW5 462 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 GOLGA6L22H0YM25 854 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 FGFR1OPO95684 399 aaKnown RBP9.77□□□□□ -0.85
DNMT1-223ENST00000591239 GNA14O95837 355 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 PSMC3P17980 439 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 CD58P19256 250 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 TRIM21P19474 475 aaKnown RBP9.77□□□□□ -0.85
DNMT1-223ENST00000591239 DDX6P26196 483 aaKnown RBP eCLIP9.77□□□□□ -0.85
DNMT1-223ENST00000591239 WEE1P30291 646 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 FMO5P49326 533 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 PFKPQ01813 784 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 GRM2Q14416 872 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 TXNDC8Q6A555 127 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 VITQ6UXI7 678 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 DENND5BQ6ZUT9 1274 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 PAQR9Q6ZVX9 377 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 FAM35AQ86V20 835 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 MFSD6LQ8IWD5 586 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 TRIM59Q8IWR1 403 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 CMTM8Q8IZV2 173 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 FUKQ8N0W3 1084 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 MAB21L3Q8N8X9 362 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 C12orf29Q8N999 325 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 GPT2Q8TD30 523 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 MRPS31Q92665 395 aaKnown RBP9.77□□□□□ -0.85
DNMT1-223ENST00000591239 TATDN2Q93075 761 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 E2F7Q96AV8 911 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-223ENST00000591239 MED15Q96RN5 788 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 MED10Q9BTT4 135 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 TRMT61BQ9BVS5 477 aaKnown RBP9.77□□□□□ -0.85
DNMT1-223ENST00000591239 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 SLC46A2Q9BY10 475 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 ZMYM5Q9UJ78 669 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 HCN4Q9Y3Q4 1203 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 PTPRDP23468 1912 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 NCANO14594 1321 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 ATP8B3O60423 1300 aa9.77□□□□□ -0.85
DNMT1-223ENST00000591239 SOBPA7XYQ1 873 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 STK25O00506 426 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 DPYSL4O14531 572 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 PMM2O15305 246 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 CILPO75339 1184 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 TADA3O75528 432 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 AP1G2O75843 785 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 PRAMEF12O95522 483 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 CHRM1P11229 460 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-223ENST00000591239 CCDC130P13994 396 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 NPR3P17342 541 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 AVPR2P30518 371 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 CLCN5P51795 746 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 MARSP56192 900 aaKnown RBP9.76□□□□□ -0.85
DNMT1-223ENST00000591239 USP46P62068 366 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 KCNH2Q12809 1159 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 SLC44A4Q53GD3 710 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 IER5LQ5T953 404 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-223ENST00000591239 MON1AQ86VX9 555 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 TTC39CQ8N584 583 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 FLCNQ8NFG4 579 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 SLC2A14Q8TDB8 520 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 WHAMMQ8TF30 809 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 DEPDC1BQ8WUY9 529 aa9.76□□□□□ -0.85
DNMT1-223ENST00000591239 RSPRY1Q96DX4 576 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms