RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 FAM163BP0C2L3 166 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 GNL1P36915 607 aaPredicted RBP20.52■□□□□ 0.87
SPHK1-207ENST00000590959 CLCNKBP51801 687 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 GRIK3Q13003 919 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 MAMLD1Q13495 774 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 LCLAT1Q6UWP7 414 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 KDM7AQ6ZMT4 941 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 PHLDB2Q86SQ0 1253 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 TADA2BQ86TJ2 420 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 ACOT1Q86TX2 421 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 GDAP1L1Q96MZ0 367 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 PRKAG2Q9UGJ0 569 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 STRIP2Q9ULQ0 834 aa20.52■□□□□ 0.87
SPHK1-207ENST00000590959 LAMA3Q16787 3333 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 MIF4GDA9UHW6 222 aaKnown RBP20.51■□□□□ 0.87
SPHK1-207ENST00000590959 MYO1FO00160 1098 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 POMCP01189 267 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 COMTP21964 271 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 GNGT1P63211 74 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 CUL1Q13616 776 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 LRIG3Q6UXM1 1119 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 ADGRF2Q8IZF7 708 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 IQCKQ8N0W5 287 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 C12orf29Q8N999 325 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 BTBD6Q96KE9 485 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 TSPAN16Q9UKR8 245 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 INPP5FQ9Y2H2 1132 aa20.51■□□□□ 0.87
SPHK1-207ENST00000590959 CYB561D2O14569 222 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 HEXIM1O94992 359 aaKnown RBP20.5■□□□□ 0.87
SPHK1-207ENST00000590959 PARNO95453 639 aaKnown RBP20.5■□□□□ 0.87
SPHK1-207ENST00000590959 FAM189BP81408 668 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 LLGL2Q6P1M3 1020 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 FAM43BQ6ZT52 329 aaPredicted RBP20.5■□□□□ 0.87
SPHK1-207ENST00000590959 MICALCLQ6ZW33 695 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 C16orf59Q7L2K0 433 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 SEPT8Q92599 483 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 DDX27Q96GQ7 796 aaKnown RBP20.5■□□□□ 0.87
SPHK1-207ENST00000590959 NME7Q9Y5B8 376 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 LTBP2Q14767 1821 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 CASTOR2A6NHX0 329 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 HMGB1P1B2RPK0 211 aaPredicted RBP20.5■□□□□ 0.87
SPHK1-207ENST00000590959 INPPL1O15357 1258 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 SPOPO43791 374 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 FGFR1P11362 822 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 WARSP23381 471 aaKnown RBP20.5■□□□□ 0.87
SPHK1-207ENST00000590959 GPD2P43304 727 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 UPP1Q16831 310 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 PTPN20Q4JDL3 420 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 GLB1LQ6UWU2 654 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 CRYBG2Q8N1P7 616 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 TMEM199Q8N511 208 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 ARFGAP2Q8N6H7 521 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 UBL4BQ8N7F7 174 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 BCAS4Q8TDM0 211 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 CACNG4Q9UBN1 327 aa20.5■□□□□ 0.87
SPHK1-207ENST00000590959 CEP290O15078 2479 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 ENPP3O14638 875 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 DDX3YO15523 660 aaKnown RBP20.49■□□□□ 0.87
SPHK1-207ENST00000590959 PDGFRBP09619 1106 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 SLC7A5Q01650 507 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 TUSC3Q13454 348 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 PPP1R26Q5T8A7 1209 aaPredicted RBP20.49■□□□□ 0.87
SPHK1-207ENST00000590959 DNAJC24Q6P3W2 148 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 FEZF2Q8TBJ5 459 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 MS4A14Q96JA4 679 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 TNIP3Q96KP6 325 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 ZIM3Q96PE6 472 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 SYNCQ9H7C4 482 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 CYTH4Q9UIA0 394 aa20.49■□□□□ 0.87
SPHK1-207ENST00000590959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.48■□□□□ 0.87
SPHK1-207ENST00000590959 CCDC188H7C350 402 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 LMO2P25791 158 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 SLC1A1P43005 524 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 TAP1Q03518 808 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 GOLGA7BQ2TAP0 167 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 TSEN2Q8NCE0 465 aaKnown RBP20.48■□□□□ 0.87
SPHK1-207ENST00000590959 C3orf20Q8ND61 904 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 UBA3Q8TBC4 463 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 ACTRT1Q8TDG2 376 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 LRRC45Q96CN5 670 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 C18orf8Q96DM3 657 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 SENP8Q96LD8 212 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 UROC1Q96N76 676 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 CPXM1Q96SM3 734 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 DPEP3Q9H4B8 488 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 WDR35Q9P2L0 1181 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 HESX1Q9UBX0 185 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 GGA2Q9UJY4 613 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 TMEM59LQ9UK28 342 aa20.48■□□□□ 0.87
SPHK1-207ENST00000590959 TCRBV5S1A1TA0A578 114 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 CEP104O60308 925 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 RFC2P35250 354 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 HSPA9P38646 679 aaKnown RBP20.47■□□□□ 0.87
SPHK1-207ENST00000590959 PDCLQ13371 301 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 TTMPQ5BVD1 217 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 ARHGAP17Q68EM7 881 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 DSTYKQ6XUX3 929 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 TMEM86AQ8N2M4 240 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 C3orf58Q8NDZ4 430 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 APBB2Q92870 758 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms