RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 EFHC1Q5JVL4 640 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 C11orf63Q6NUN7 778 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 CCDC80Q76M96 950 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 LZICQ8WZA0 190 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 SLC13A1Q9BZW2 595 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 PAIP1Q9H074 479 aaKnown RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 GINM1Q9NU53 330 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 EIF2B2P49770 351 aaKnown RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 SLC5A3P53794 718 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 CDH15P55291 814 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 PSPC1Q8WXF1 523 aaKnown RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 TMEM117Q9H0C3 514 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 MTO1Q9Y2Z2 717 aaKnown RBP15.88■□□□□ 0.13
CIRBP-228ENST00000590347 ACTL7BQ9Y614 415 aa15.88■□□□□ 0.13
CIRBP-228ENST00000590347 TGFB1I1O43294 461 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 HNRNPCL1O60812 293 aaKnown RBP15.87■□□□□ 0.13
CIRBP-228ENST00000590347 FDFT1P37268 417 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 ADCY7P51828 1080 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 GRM2Q14416 872 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 KRT81Q14533 505 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 CES4AQ5XG92 561 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 DHX38Q92620 1227 aaKnown RBP15.87■□□□□ 0.13
CIRBP-228ENST00000590347 RBM38Q9H0Z9 239 aaKnown RBP15.87■□□□□ 0.13
CIRBP-228ENST00000590347 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.87■□□□□ 0.13
CIRBP-228ENST00000590347 SAE1Q9UBE0 346 aaPredicted RBP15.87■□□□□ 0.13
CIRBP-228ENST00000590347 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 TCEA3O75764 348 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 CD1EP15812 388 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 ARSEP51690 589 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 PSMD6Q15008 389 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 DCAF6Q58WW2 860 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 CERKQ8TCT0 537 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 PAFAH2Q99487 392 aa15.87■□□□□ 0.13
CIRBP-228ENST00000590347 A6NL46 340 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 J3QRK9 145 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 SORBS3O60504 671 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 POLR2MP0CAP2 368 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 YWHAGP61981 247 aaKnown RBP eCLIP15.86■□□□□ 0.13
CIRBP-228ENST00000590347 TMPRSS15P98073 1019 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 CDHR3Q6ZTQ4 885 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 PTAR1Q7Z6K3 402 aaPredicted RBP15.86■□□□□ 0.13
CIRBP-228ENST00000590347 NUP93Q8N1F7 819 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 DQX1Q8TE96 717 aaKnown RBP15.86■□□□□ 0.13
CIRBP-228ENST00000590347 FBXL8Q96CD0 374 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 DCUN1D1Q96GG9 259 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 SERAC1Q96JX3 654 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 DHRS1Q96LJ7 313 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 RRN3Q9NYV6 651 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 PSMC3IPQ9P2W1 217 aaPredicted RBP15.86■□□□□ 0.13
CIRBP-228ENST00000590347 DYTNA2CJ06 578 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 FSCN2O14926 492 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 MAGEC1O60732 1142 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 NAT1P18440 290 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 MAPK4P31152 587 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 PICALMQ13492 652 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 MSS51Q4VC12 460 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 XKR5Q6UX68 686 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 MYCT1Q8N699 235 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 APOL6Q9BWW8 343 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 PSTPIP2Q9H939 334 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 VPS51Q9UID3 782 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 DNPEPQ9ULA0 475 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 AP4B1Q9Y6B7 739 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 SPATA31A6Q5VVP1 1343 aa15.86■□□□□ 0.13
CIRBP-228ENST00000590347 F8W8V4 182 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 NDC80O14777 642 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 DNAJA2O60884 412 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 FGRP09769 529 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 GPX6P59796 221 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 TSPY1Q01534 308 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 HNRNPDQ14103 355 aaKnown RBP15.85■□□□□ 0.13
CIRBP-228ENST00000590347 CATSPER3Q86XQ3 398 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 CCDC127Q96BQ5 260 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 SENP7Q9BQF6 1050 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 LRP5O75197 1615 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 CRTAMO95727 393 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 FUCA1P04066 466 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 CDH2P19022 906 aaPredicted RBP15.85■□□□□ 0.13
CIRBP-228ENST00000590347 ITGA9Q13797 1035 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 TGFBIQ15582 683 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 NRF1Q16656 503 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 DOK7Q18PE1 504 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 BBS9Q3SYG4 887 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 TMCO4Q5TGY1 634 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 KRT27Q7Z3Y8 459 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 C20orf27Q9GZN8 174 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 POLLQ9UGP5 575 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 TAGLN3Q9UI15 199 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 CICQ96RK0 1608 aaPredicted RBP15.85■□□□□ 0.13
CIRBP-228ENST00000590347 PIK3CDO00329 1044 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 CHMP2AO43633 222 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 GGPS1O95749 300 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 ALDH1A3P47895 512 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 SLC12A3P55017 1021 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 CDKL1Q00532 357 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 C3orf62Q6ZUJ4 267 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 LPCAT2Q7L5N7 544 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 ZNF410Q86VK4 478 aa15.85■□□□□ 0.13
CIRBP-228ENST00000590347 TRIML2Q8N7C3 387 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms