RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 GUCY2FP51841 1108 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 PIGHQ14442 188 aaPredicted RBP10.98□□□□□ -0.65
LIG3-203ENST00000585370 ACAP1Q15027 740 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 PLEKHG4Q58EX7 1191 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 SEL1L2Q5TEA6 688 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 ARHGAP17Q68EM7 881 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 DNAJC24Q6P3W2 148 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 PASD1Q8IV76 773 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 CRYBG2Q8N1P7 616 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 WDTC1Q8N5D0 677 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 NOA1Q8NC60 698 aaKnown RBP10.98□□□□□ -0.65
LIG3-203ENST00000585370 APPL2Q8NEU8 664 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 STK32AQ8WU08 396 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 CD101Q93033 1021 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 C18orf25Q96B23 403 aaPredicted RBP10.98□□□□□ -0.65
LIG3-203ENST00000585370 C18orf8Q96DM3 657 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 TNIP3Q96KP6 325 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 RUNDC3BQ96NL0 473 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 TGS1Q96RS0 853 aaKnown RBP10.98□□□□□ -0.65
LIG3-203ENST00000585370 PSMB7Q99436 277 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 C11orf70Q9BRQ4 267 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 SNX25Q9H3E2 840 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 ARFGAP3Q9NP61 516 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 CYLDQ9NQC7 956 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 KLK14Q9P0G3 267 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 TUBGCP4Q9UGJ1 667 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 C5orf42Q9H799 3197 aa10.98□□□□□ -0.65
LIG3-203ENST00000585370 TMEM191CA6NGB0 347 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 SIGLEC16A6NMB1 481 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 TMEM110-MUSTN1A8MSY1 372 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 O00370 1275 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 ATMINO43313 823 aaPredicted RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 PSTPIP1O43586 416 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 MICAL2O94851 1124 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 EOMESO95936 686 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 CFHP08603 1231 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 RHOXF2BP0C7M4 288 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 WARSP23381 471 aaKnown RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 LILRA4P59901 499 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 HTRA4P83105 476 aaPredicted RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 LPIN1Q14693 890 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 GLRA4Q5JXX5 417 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 LRRC38Q5VT99 294 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 DENND1BQ6P3S1 775 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 DCUN1D2Q6PH85 259 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 FBXO38Q6PIJ6 1188 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 MAATS1Q7Z4T9 603 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 RHOT1Q8IXI2 618 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 TMEM86AQ8N2M4 240 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 EIF1ADQ8N9N8 165 aaKnown RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 C1orf131Q8NDD1 294 aaKnown RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 OR6B3Q8NGW1 331 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 CCDC26Q8TAB7 109 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 IPO4Q8TEX9 1081 aaKnown RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 FNIP1Q8TF40 1166 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.97□□□□□ -0.65
LIG3-203ENST00000585370 MS4A14Q96JA4 679 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 UROC1Q96N76 676 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 NCAPGQ9BPX3 1015 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 RHOXF2Q9BQY4 288 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 C17orf80Q9BSJ5 609 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 FTHL17Q9BXU8 183 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 GOLPH3Q9H4A6 298 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 SLITRK6Q9H5Y7 841 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 AGO3Q9H9G7 860 aaKnown RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
LIG3-203ENST00000585370 HESX1Q9UBX0 185 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 INSL6Q9Y581 213 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 MYO7AQ13402 2215 aa10.97□□□□□ -0.65
LIG3-203ENST00000585370 MICAL3Q7RTP6 2002 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 COL4A4P53420 1690 aaPredicted RBP10.96□□□□□ -0.65
LIG3-203ENST00000585370 TCRBV5S1A1TA0A578 114 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 A8MXQ7 604 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 KRIT1O00522 736 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 PTGESO14684 152 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 INPPL1O15357 1258 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 AMHP03971 560 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 GHRP10912 638 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 CD52P31358 61 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 GPD2P43304 727 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 LHX1P48742 406 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 DNA2P51530 1060 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 CLCN6P51797 869 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 RBM10P98175 930 aaKnown RBP10.96□□□□□ -0.65
LIG3-203ENST00000585370 C2orf54Q08AI8 447 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 LONRF2Q1L5Z9 754 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 SOWAHAQ2M3V2 549 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 C8orf74Q6P047 294 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 ZDHHC17Q8IUH5 632 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 IFT20Q8IY31 132 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 NIPA2Q8N8Q9 360 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 SP7Q8TDD2 431 aaPredicted RBP10.96□□□□□ -0.65
LIG3-203ENST00000585370 TWNKQ96RR1 684 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 ADAM2Q99965 735 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 MRPL45Q9BRJ2 306 aaKnown RBP10.96□□□□□ -0.65
LIG3-203ENST00000585370 SYNCQ9H7C4 482 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 RSAD1Q9HA92 442 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 RGS18Q9NS28 235 aa10.96□□□□□ -0.65
LIG3-203ENST00000585370 RBM12Q9NTZ6 932 aaKnown RBP10.96□□□□□ -0.65
LIG3-203ENST00000585370 KANSL3Q9P2N6 904 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms