RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 SCML4Q8N228 414 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 ATAD1Q8NBU5 361 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 MSANTD4Q8NCY6 345 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 OR8K1Q8NGG5 319 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 KCTD13Q8WZ19 329 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 OVCA2Q8WZ82 227 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 BAP1Q92560 729 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 KAT5Q92993 513 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 HLA-CQ95604 372 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 TRMT2BQ96GJ1 504 aaKnown RBP9.87□□□□□ -0.83
UBBP4-201ENST00000583708 MYRFLQ96LU7 910 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 RIPOR3Q96MK2 946 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 FAM161BQ96MY7 647 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 TWNKQ96RR1 684 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 MED10Q9BTT4 135 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 GPR88Q9GZN0 384 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 ADAM7Q9H2U9 754 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 FBXO44Q9H4M3 255 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 MAN1C1Q9NR34 630 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 ABI2Q9NYB9 513 aaPredicted RBP9.87□□□□□ -0.83
UBBP4-201ENST00000583708 IL37Q9NZH6 218 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 INSL5Q9Y5Q6 135 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 ZFP37Q9Y6Q3 630 aaPredicted RBP9.87□□□□□ -0.83
UBBP4-201ENST00000583708 PRRC2BQ5JSZ5 2229 aaKnown RBP9.87□□□□□ -0.83
UBBP4-201ENST00000583708 PLXNA4Q9HCM2 1894 aa9.87□□□□□ -0.83
UBBP4-201ENST00000583708 NCANO14594 1321 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 CLUHO75153 1309 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 VWA8A3KMH1 1905 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 SPDYE4A6NLX3 237 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 RNF225M0QZC1 329 aaPredicted RBP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 XPO1O14980 1071 aaKnown RBP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 SART1O43290 800 aaKnown RBP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 CYP11B1P15538 503 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 EPCAMP16422 314 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 BDNFP23560 247 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 CDH5P33151 784 aaPredicted RBP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 GRIK1P39086 918 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 PSEN1P49768 467 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 EPHA5P54756 1037 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 PSMC1P62191 440 aaKnown RBP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 CDK17Q00537 523 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 CDR2Q01850 454 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 TBX2Q13207 712 aaPredicted RBP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 TAF12Q16514 161 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 MGAT5BQ3V5L5 792 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 ZNF394Q53GI3 561 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 PPP1R26Q5T8A7 1209 aaPredicted RBP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 CYP4A22Q5TCH4 519 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 GJB7Q6PEY0 223 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 PAQR9Q6ZVX9 377 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 Q7L0L9 218 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 IRF2BP2Q7Z5L9 587 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 GPR149Q86SP6 731 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 FAM35AQ86V20 835 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 NUP93Q8N1F7 819 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 ZNF276Q8N554 614 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 C12orf29Q8N999 325 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 TMEM35BQ8NCS4 154 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 PDZD8Q8NEN9 1154 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 SLC7A14Q8TBB6 771 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 SLC2A14Q8TDB8 520 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 PSMG2Q969U7 264 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 MSLNLQ96KJ4 702 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 TMEM209Q96SK2 561 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 TRIM62Q9BVG3 475 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 TTLL2Q9BWV7 592 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 DPEP3Q9H4B8 488 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 IGFLR1Q9H665 355 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 GRPEL1Q9HAV7 217 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 NLRC4Q9NPP4 1024 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 TMLHEQ9NVH6 421 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBBP4-201ENST00000583708 NME7Q9Y5B8 376 aa9.86□□□□□ -0.83
UBBP4-201ENST00000583708 CCDC195A0A1B0GUA6 201 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 FAM92AA1XBS5 289 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 AKR1B15C9JRZ8 316 aaPredicted RBP9.85□□□□□ -0.83
UBBP4-201ENST00000583708 EPHB6O15197 1021 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 THAP12O43422 761 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 AP1G2O75843 785 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 FBXO21O94952 628 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 SEC24AO95486 1093 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 VNN2O95498 520 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 GYPCP04921 128 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 SERPING1P05155 500 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 OR4Q2P0C623 313 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 GZMAP12544 262 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 CYP2F1P24903 491 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 DDX6P26196 483 aaKnown RBP eCLIP9.85□□□□□ -0.83
UBBP4-201ENST00000583708 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 RPL34P49207 117 aaKnown RBP9.85□□□□□ -0.83
UBBP4-201ENST00000583708 KLK7P49862 253 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 GSDMDP57764 484 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 GSE1Q14687 1217 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 ASIC2Q16515 512 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 LEXMQ3ZCV2 418 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 PKDCCQ504Y2 493 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 DENND5BQ6ZUT9 1274 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 DNAJB7Q7Z6W7 309 aaPredicted RBP9.85□□□□□ -0.83
UBBP4-201ENST00000583708 ZDHHC17Q8IUH5 632 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms