RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 HDAC9Q9UKV0 1011 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 PAXBP1Q9Y5B6 917 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 RAD54BQ9Y620 910 aa5.66□□□□□ -1.5
SMCHD1-205ENST00000581383 A0A1W2PPC4 97 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 PLEKHD1A6NEE1 506 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 F5H423 210 aaPredicted RBP5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 TOR1BO14657 336 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 DCLK1O15075 740 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 THAP12O43422 761 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 ESRRBO95718 433 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 ANXA2P07355 339 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 CDK4P11802 303 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 FGFR2P21802 821 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 KLRC1P26715 233 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 PPM1AP35813 382 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 VIPR2P41587 438 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 TOB1P50616 345 aaPredicted RBP5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 MAPK10P53779 464 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 MC2RQ01718 297 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 IQCB1Q15051 598 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 PLA1AQ53H76 456 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 DGKKQ5KSL6 1271 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 GORABQ5T7V8 394 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 RRAGBQ5VZM2 374 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 ZKSCAN2Q63HK3 967 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 ZDHHC24Q6UX98 284 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 TXLNBQ8N3L3 684 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 TMEM132CQ8N3T6 1108 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 BOLLQ8N9W6 283 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 POC1BQ8TC44 478 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 SPSB4Q96A44 273 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 MOGAT1Q96PD6 335 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 MED15Q96RN5 788 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 SYNPO2LQ9H987 977 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 PTPRHQ9HD43 1115 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 TRMT13Q9NUP7 481 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 LRCH1Q9Y2L9 728 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 CEP83Q9Y592 693 aa5.65□□□□□ -1.5
SMCHD1-205ENST00000581383 LOC102724159A0A0B4J2E5 919 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 MBD3L4A6NDZ8 208 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 MBD3L3A6NE82 208 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 EIF3JO75822 258 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 SUN1O94901 812 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 C1RP00736 705 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 CFIP05156 583 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 TXNP10599 105 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 XRCC6P12956 609 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 KCNA2P16389 499 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 ZNF37AP17032 561 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 IL6STP40189 918 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 GCLCP48506 637 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 CARSP49589 748 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 PWP2Q15269 919 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 FAM83BQ5T0W9 1011 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 B3GNTL1Q67FW5 361 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 ARHGEF25Q86VW2 580 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 PRIMA1Q86XR5 153 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 ZNF280BQ86YH2 543 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 SMC5Q8IY18 1101 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 Q8NA96 180 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 POF1BQ8WVV4 589 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 LINC00476Q8WZB0 136 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 ZC3H10Q96K80 434 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 Q96MF0 132 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 BBC3Q96PG8 261 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 ADAM2Q99965 735 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 HEPHQ9BQS7 1158 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 CRB3Q9BUF7 120 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 ZSCAN32Q9NX65 697 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 MYO1AQ9UBC5 1043 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 MID2Q9UJV3 735 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 TNFRSF18Q9Y5U5 241 aa5.64□□□□□ -1.51
SMCHD1-205ENST00000581383 RAB27BO00194 218 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 IFRD1O00458 451 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 ZFPL1O95159 310 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 CYP2C9P11712 490 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 FBLP22087 321 aaKnown RBP5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 TRAPPC10P48553 1259 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 HSPA7P48741 367 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 PTH2RP49190 550 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 ZNF134P52741 427 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 WNT3P56703 355 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 LILRA4P59901 499 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 CXADRP78310 365 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 FPGSQ05932 587 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 FOXI1Q12951 378 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 HNRNPA0Q13151 305 aaKnown RBP5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 SLC35G1Q2M3R5 365 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 CD300EQ496F6 205 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 LAYNQ6UX15 382 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 BEND5Q7L4P6 421 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 YAF2Q8IY57 180 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 SDR16C5Q8N3Y7 309 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 IPCEF1Q8WWN9 437 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 NACC2Q96BF6 587 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 PTCD3Q96EY7 689 aaKnown RBP5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 LRRC46Q96FV0 321 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 MESP1Q9BRJ9 268 aa5.63□□□□□ -1.51
SMCHD1-205ENST00000581383 WDR12Q9GZL7 423 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms