RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 LAYNQ6UX15 382 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 C4orf22Q6V702 233 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 LPCAT2Q7L5N7 544 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TMC2Q8TDI7 906 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 DACT3Q96B18 629 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 RMDN2Q96LZ7 410 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 NACA2Q9H009 215 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 SEPT3Q9UH03 358 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 E9PBE3 544 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 KLHL41O60662 606 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 SRP72O76094 671 aaKnown RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 GH1P01241 217 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 GRK2P25098 689 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TRPC1P48995 793 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 ARHGDIAP52565 204 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 CCDC15Q0P6D6 951 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 RWDD4Q6NW29 188 aaKnown RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 MFSD7Q6UXD7 560 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 CCDC117Q8IWD4 279 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 EPS8L1Q8TE68 723 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 FSD1LQ9BXM9 530 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 NIF3L1Q9GZT8 377 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 TOPORSQ9NS56 1045 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 KCNK4Q9NYG8 393 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 CLIC5Q9NZA1 410 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 STAP1Q9ULZ2 295 aa13.64□□□□□ -0.23
PCDHGB3-201ENST00000576222 DCTN2Q13561 401 aaKnown RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 TTC39CQ8N584 583 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 LRRC57Q8N9N7 239 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZNF668Q96K58 619 aaPredicted RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 CNDP1Q96KN2 507 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 BEGAINQ9BUH8 593 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 KCTD10Q9H3F6 313 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 PALMDQ9NP74 551 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 AVENQ9NQS1 362 aaPredicted RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 SNX13Q9Y5W8 968 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 IGSF9BQ9UPX0 1349 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 GOLGA8CPA6NN73 597 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 ABHD2P08910 425 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZSCAN5DPP0CG00 497 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 HSPA1AP0DMV8 641 aaKnown RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 HSPA1BP0DMV9 641 aaKnown RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 RALBP11234 206 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 NPR1P16066 1061 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 RGS7P49802 495 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 NUP107P57740 925 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 FAAP100Q0VG06 881 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 FAM182BQ5T319 152 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 DDIASQ8IXT1 998 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 FAM167AQ96KS9 214 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 GCNAQ96QF7 691 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 ZBTB18Q99592 522 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 NDNQ99608 321 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 RAD17O75943 681 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 VCAM1P19320 739 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 TNFAIP2Q03169 654 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 STX5Q13190 355 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 STXBP2Q15833 593 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 XKR3Q5GH77 459 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 B3GNT6Q6ZMB0 384 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 OTOAQ7RTW8 1153 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 PRUNE1Q86TP1 453 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 SULF1Q8IWU6 871 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 KAT5Q92993 513 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 TMEM109Q9BVC6 243 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 DDX28Q9NUL7 540 aaKnown RBP13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 THAP1Q9NVV9 213 aa13.63□□□□□ -0.23
PCDHGB3-201ENST00000576222 ANPEPP15144 967 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 GCLCP48506 637 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 EFHC2Q5JST6 749 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 TRABD2AQ86V40 505 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 HAS1Q92839 578 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 C2orf40Q9H1Z8 148 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 SLC12A4Q9UP95 1085 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 ATRNO75882 1429 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 TPST1O60507 370 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 DAB1O75553 588 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 EFNA5P52803 228 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 RPS6P62753 249 aaKnown RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 PRPF18Q99633 342 aaKnown RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 SMIM31A0A1B0GVY4 71 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 DDX3YO15523 660 aaKnown RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 PROCP04070 461 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 GPD1P21695 349 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 SP100P23497 879 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 PDAP1Q13442 181 aaKnown RBP13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 BLOC1S6Q9UL45 172 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 FAM237BA0A1B0GVD1 139 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 H0Y626 953 aa13.62□□□□□ -0.23
PCDHGB3-201ENST00000576222 FSCN2O14926 492 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms