RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ACO1P21399 889 aaKnown RBP9.25□□□□□ -0.93
SMG6-216ENST00000575176 BDNFP23560 247 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 GABRR2P28476 465 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 VIPR2P41587 438 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 TUFMP49411 452 aaKnown RBP9.25□□□□□ -0.93
SMG6-216ENST00000575176 NDST1P52848 882 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 STX17P56962 302 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 TNNC1P63316 161 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 GPC5P78333 572 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 FCHO2Q0JRZ9 810 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 USP4Q13107 963 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 PAK1Q13153 545 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 SGSM1Q2NKQ1 1148 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 KRT39Q6A163 491 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 KLHL10Q6JEL2 608 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 GPRIN1Q7Z2K8 1008 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 CRYBG2Q8N1P7 616 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 FBXL13Q8NEE6 735 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 PRSS33Q8NF86 280 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 ZSCAN18Q8TBC5 510 aaPredicted RBP9.25□□□□□ -0.93
SMG6-216ENST00000575176 SMARCD2Q92925 531 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 KAT5Q92993 513 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 TATDN2Q93075 761 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 C8orf48Q96LL4 319 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 MMS19Q96T76 1030 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 SMOQ99835 787 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 ZSWIM1Q9BR11 485 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 SLC46A2Q9BY10 475 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 GTPBP4Q9BZE4 634 aaKnown RBP9.25□□□□□ -0.93
SMG6-216ENST00000575176 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMG6-216ENST00000575176 GCNT4Q9P109 453 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 CCL26Q9Y258 94 aa9.25□□□□□ -0.93
SMG6-216ENST00000575176 NYNRINQ9P2P1 1898 aaKnown RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 PI15O43692 258 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 GLULP15104 373 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 COL9A1P20849 921 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 GNL1P36915 607 aaPredicted RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 ALDH1A3P47895 512 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 FMO5P49326 533 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 ZNF132P52740 706 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 EPHB3P54753 998 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 FZD5Q13467 585 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 TRPC3Q13507 836 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 VSTM1Q6UX27 236 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 CLEC20AQ6ZU45 233 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 MTSS1LQ765P7 747 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 BHLHA9Q7RTU4 235 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 FRMD5Q7Z6J6 570 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 ACOT1Q86TX2 421 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 FBXL6Q8N531 539 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 C12orf29Q8N999 325 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 SLC4A11Q8NBS3 891 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 OR6B3Q8NGW1 331 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 FAXDC2Q96IV6 333 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 ZFRQ96KR1 1074 aaKnown RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 CEP295NLQ96MC4 621 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 ZNF512Q96ME7 567 aaPredicted RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 KCNK16Q96T55 309 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 SMG9Q9H0W8 520 aaKnown RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 HSD3B7Q9H2F3 369 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 MMRN2Q9H8L6 949 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 RAB20Q9NX57 234 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 WNT16Q9UBV4 365 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 ARMCX3Q9UH62 379 aaPredicted RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 RWDD2AQ9UIY3 292 aa9.24□□□□□ -0.93
SMG6-216ENST00000575176 HOOK1Q9UJC3 728 aaKnown RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 AJAP1Q9UKB5 411 aaPredicted RBP9.24□□□□□ -0.93
SMG6-216ENST00000575176 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 OTOL1A6NHN0 477 aaPredicted RBP9.23□□□□□ -0.93
SMG6-216ENST00000575176 A8MXQ7 604 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 ZNF197O14709 1029 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 PHACTR2O75167 634 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 OAS1P00973 400 aaKnown RBP9.23□□□□□ -0.93
SMG6-216ENST00000575176 CFHP08603 1231 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 ZDHHC11BP0C7U3 371 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 CSH1P0DML2 217 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 CSH2P0DML3 217 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 CHRM1P11229 460 aaPredicted RBP9.23□□□□□ -0.93
SMG6-216ENST00000575176 KRT13P13646 458 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 PPP1R2P41236 205 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 RAD23BP54727 409 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 TCF15Q12870 199 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 GRM2Q14416 872 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 ZNF77Q15935 545 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 DCAF17Q5H9S7 520 aaPredicted RBP9.23□□□□□ -0.93
SMG6-216ENST00000575176 MIIPQ5JXC2 388 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 TXNDC8Q6A555 127 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 IQCEQ6IPM2 695 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 C4orf50Q6ZRC1 276 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 ITIH5Q86UX2 942 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 UNC93AQ86WB7 457 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 SPATA2LQ8IUW3 424 aaPredicted RBP9.23□□□□□ -0.93
SMG6-216ENST00000575176 ARID3BQ8IVW6 561 aaPredicted RBP9.23□□□□□ -0.93
SMG6-216ENST00000575176 ARHGEF19Q8IW93 802 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 CCDC105Q8IYK2 499 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 SIX5Q8N196 739 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 ELMOD1Q8N336 334 aa9.23□□□□□ -0.93
SMG6-216ENST00000575176 SLC2A14Q8TDB8 520 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms