RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SEC13P55735 322 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 SIM1P81133 766 aaPredicted RBP13.41□□□□□ -0.26
SNX29-207ENST00000568949 DDR2Q16832 855 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 SDHAF4Q5VUM1 108 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 SLC39A4Q6P5W5 647 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 SLC23A3Q6PIS1 610 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 NT5DC4Q86YG4 428 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 CCDC83Q8IWF9 413 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 CCDC33Q8N5R6 958 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 KIAA1958Q8N8K9 716 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 ARL14EPQ8N8R7 260 aaPredicted RBP13.41□□□□□ -0.26
SNX29-207ENST00000568949 FSIP1Q8NA03 581 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 FAM184AQ8NB25 1140 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 WHAMMQ8TF30 809 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 CDK5RAP3Q96JB5 506 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 SPACA7Q96KW9 195 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 ZNF560Q96MR9 790 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 FNBP1Q96RU3 617 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 ACBD6Q9BR61 282 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 LINC00597Q9H2U6 94 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 ARHGAP26Q9UNA1 814 aa13.41□□□□□ -0.26
SNX29-207ENST00000568949 MYO18AQ92614 2054 aaKnown RBP13.41□□□□□ -0.26
SNX29-207ENST00000568949 SPAARA0A1B0GVQ0 90 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 MAP3K13O43283 966 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 TRAK2O60296 914 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 FAM13AO94988 1023 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 HDCP19113 662 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 CYP2F1P24903 491 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 ACOT2P49753 483 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 PDE6CP51160 858 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 ZNF131P52739 623 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
SNX29-207ENST00000568949 HNRNPDQ14103 355 aaKnown RBP13.4□□□□□ -0.26
SNX29-207ENST00000568949 KCNB1Q14721 858 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 GAB4Q2WGN9 574 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
SNX29-207ENST00000568949 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
SNX29-207ENST00000568949 TMEM92Q6UXU6 159 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 HDDC3Q8N4P3 179 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 MYCT1Q8N699 235 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 TTC16Q8NEE8 873 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 PLIN2Q99541 437 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 REEP2Q9BRK0 252 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.26
SNX29-207ENST00000568949 TMEM74BQ9NUR3 256 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 STYXL1Q9Y6J8 313 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 HELZP42694 1942 aaKnown RBP13.4□□□□□ -0.26
SNX29-207ENST00000568949 ADAMTS20P59510 1910 aa13.4□□□□□ -0.26
SNX29-207ENST00000568949 DSPP15924 2871 aaKnown RBP13.39□□□□□ -0.27
SNX29-207ENST00000568949 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 MYMKA6NI61 221 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 SLC26A4O43511 780 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 CAPNS1P04632 268 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 HNRNPLP14866 589 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNX29-207ENST00000568949 PTGER3P43115 390 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 ATP2C1P98194 919 aaPredicted RBP13.39□□□□□ -0.27
SNX29-207ENST00000568949 GTF2BQ00403 316 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 MYL7Q01449 175 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 MAP7D1Q3KQU3 841 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 CFAP221Q4G0U5 840 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 ZC2HC1CQ53FD0 456 aaPredicted RBP13.39□□□□□ -0.27
SNX29-207ENST00000568949 LYSMD4Q5XG99 296 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 TTC30AQ86WT1 665 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 PROSER1Q86XN7 944 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 TMEFF1Q8IYR6 380 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 TMEM86AQ8N2M4 240 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 CEP76Q8TAP6 659 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 LRRC15Q8TF66 581 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 RLN3Q8WXF3 142 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 FUBP3Q96I24 572 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNX29-207ENST00000568949 PKMYT1Q99640 499 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 DDX43Q9NXZ2 648 aaKnown RBP13.39□□□□□ -0.27
SNX29-207ENST00000568949 PILRBQ9UKJ0 227 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 AGO2Q9UKV8 859 aaKnown RBP13.39□□□□□ -0.27
SNX29-207ENST00000568949 SLC6A14Q9UN76 642 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 ACACAQ13085 2346 aa13.39□□□□□ -0.27
SNX29-207ENST00000568949 A0A0A0MRY4 1105 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 C2orf78A6NCI8 922 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 ANTXRLA6NF34 631 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 HUS1O60921 280 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 IL18RAPO95256 599 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 KLF8O95600 359 aaPredicted RBP13.38□□□□□ -0.27
SNX29-207ENST00000568949 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
SNX29-207ENST00000568949 EIF2DP41214 584 aaKnown RBP13.38□□□□□ -0.27
SNX29-207ENST00000568949 MAGEA11P43364 429 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 ATXN3P54252 364 aaPredicted RBP13.38□□□□□ -0.27
SNX29-207ENST00000568949 DUOXA1Q1HG43 343 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 ZNF423Q2M1K9 1284 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 EOGTQ5NDL2 527 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 ARMCX6Q7L4S7 300 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 RAB44Q7Z6P3 723 aaPredicted RBP13.38□□□□□ -0.27
SNX29-207ENST00000568949 GPBP1Q86WP2 473 aa13.38□□□□□ -0.27
SNX29-207ENST00000568949 ALLCQ8N6M5 410 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms