RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 AP3M2P53677 418 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 ORC1Q13415 861 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 SPOPLQ6IQ16 392 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 ZNF852Q6ZMS4 543 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 LIMS2Q7Z4I7 341 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 TMEM150AQ86TG1 271 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 FAM186BQ8IYM0 893 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 GUF1Q8N442 669 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 TMEM174Q8WUU8 243 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 SMARCE1Q969G3 411 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 E2F7Q96AV8 911 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 FUBP3Q96I24 572 aaKnown RBP eCLIP14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 MED10Q9BTT4 135 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 DDX23Q9BUQ8 820 aaKnown RBP14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 BCO2Q9BYV7 579 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 SPATA6Q9NWH7 488 aaPredicted RBP14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 TRAF3IP3Q9Y228 551 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 PIAS3Q9Y6X2 628 aa14.54□□□□□ -0.08
VPS9D1-204ENST00000565023 CACNA1IQ9P0X4 2223 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 PATJQ8NI35 1801 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 TADA3O75528 432 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 NOL4O94818 638 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 HLA-DRAP01903 254 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 CCNE1P24864 410 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 KPNA1P52294 538 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 FOXK2Q01167 660 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 ADAM9Q13443 819 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 MAPRE1Q15691 268 aaKnown RBP14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 CFAP221Q4G0U5 840 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 COBLL1Q53SF7 1204 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 ZNF658Q5TYW1 1059 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 SV2AQ7L0J3 742 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 FRMD5Q7Z6J6 570 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 CMTM8Q8IZV2 173 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 MYCBPAPQ8TBZ2 947 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 TMC2Q8TDI7 906 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 BPIFB1Q8TDL5 484 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 GTPBP4Q9BZE4 634 aaKnown RBP14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 ZNF518BQ9C0D4 1074 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 DLGAP2Q9P1A6 1054 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 UXTQ9UBK9 157 aaPredicted RBP14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 CCL26Q9Y258 94 aa14.53□□□□□ -0.08
VPS9D1-204ENST00000565023 CACNA1BQ00975 2339 aa14.52□□□□□ -0.08
VPS9D1-204ENST00000565023 F8VP50 259 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 CHADO15335 359 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 STAU1O95793 577 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 ABL1P00519 1130 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 RPL13P26373 211 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 PSMC2P35998 433 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 PRCPP42785 496 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 CACNA2D1P54289 1103 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 USP46P62068 366 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 TNK2Q07912 1038 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 ZACNQ401N2 412 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 C1orf220Q5T0J3 134 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 VSTM1Q6UX27 236 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 CELF5Q8N6W0 485 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 B3GALNT2Q8NCR0 500 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 FAM3CQ92520 227 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 CYP2S1Q96SQ9 504 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 GTSE1Q9NYZ3 720 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 MRPS17Q9Y2R5 130 aaKnown RBP14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 FAM186AA6NE01 2351 aa14.52□□□□□ -0.09
VPS9D1-204ENST00000565023 F5P12259 2224 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 SHISA7A6NL88 538 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 MAN2B1O00754 1011 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 NCAM2O15394 837 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 CKMP06732 381 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 P4HA1P13674 534 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 MAGEA11P43364 429 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 CLDN10P78369 228 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 PPP3CAQ08209 521 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 FCHO2Q0JRZ9 810 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 SGSM1Q2NKQ1 1148 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 ARHGAP29Q52LW3 1261 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 TRIM68Q6AZZ1 485 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 DENND5BQ6ZUT9 1274 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 INTS8Q75QN2 995 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 ACOT1Q86TX2 421 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 C1orf210Q8IVY1 113 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 ARL14EPQ8N8R7 260 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 TAS1R2Q8TE23 839 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 USP13Q92995 863 aaPredicted RBP14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 B3GNT5Q9BYG0 378 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 THG1LQ9NWX6 298 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 HMGXB4Q9UGU5 601 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 MAN1B1Q9UKM7 699 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 R4GN57 208 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 ATG2BQ96BY7 2078 aa14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 HELZP42694 1942 aaKnown RBP14.51□□□□□ -0.09
VPS9D1-204ENST00000565023 TRAV19A0A0A6YYK7 116 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 C2orf78A6NCI8 922 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 TRIM49BA6NDI0 452 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 GOLGA6L22H0YM25 854 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 TRIM66O15016 1216 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 LAMTOR5O43504 91 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 GFRA3O60609 400 aa14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 EPB41P11171 864 aaKnown RBP14.5□□□□□ -0.09
VPS9D1-204ENST00000565023 CCDC130P13994 396 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms