RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 FAM35AQ86V20 835 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 UNC93AQ86WB7 457 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CREBRFQ8IUR6 639 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 UBALD2Q8IYN6 164 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 LMO3Q8TAP4 145 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 NXPE3Q969Y0 559 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 ASIC4Q96FT7 647 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CNOT6LQ96LI5 555 aaKnown RBP12.86□□□□□ -0.35
USP8-212ENST00000560730 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 ATXN3LQ9H3M9 355 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 CISHQ9NSE2 258 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 FAM49BQ9NUQ9 324 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 TMEM63CQ9P1W3 806 aa12.86□□□□□ -0.35
USP8-212ENST00000560730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP8-212ENST00000560730 NUP210Q8TEM1 1887 aaPredicted RBP12.86□□□□□ -0.35
USP8-212ENST00000560730 NCANO14594 1321 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 TADA3O75528 432 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 MBD3O95983 291 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
USP8-212ENST00000560730 VIPR2P41587 438 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 GPC5P78333 572 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 ZNF394Q53GI3 561 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 HSP90AA4PQ58FG1 418 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 GPR158Q5T848 1215 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 HFE2Q6ZVN8 426 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 ZSCAN18Q8TBC5 510 aaPredicted RBP12.85□□□□□ -0.35
USP8-212ENST00000560730 RSPRY1Q96DX4 576 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 SPATA17Q96L03 361 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 C8orf48Q96LL4 319 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 KCNK16Q96T55 309 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 NT5C1AQ9BXI3 368 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 SLITRK6Q9H5Y7 841 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 DUSP12Q9UNI6 340 aa12.85□□□□□ -0.35
USP8-212ENST00000560730 BEST1O76090 585 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 FGF19O95750 216 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 PDGFBP01127 241 aaPredicted RBP12.84□□□□□ -0.35
USP8-212ENST00000560730 AFPP02771 609 aaKnown RBP12.84□□□□□ -0.35
USP8-212ENST00000560730 CDC25CP30307 473 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 RAD23BP54727 409 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 CUL2Q13617 745 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 TPD52L1Q16890 204 aaPredicted RBP12.84□□□□□ -0.35
USP8-212ENST00000560730 CCDC183Q5T5S1 534 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 IER5LQ5T953 404 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 ZMIZ2Q8NF64 920 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 SMARCD2Q92925 531 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 KAT5Q92993 513 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 TRMT2BQ96GJ1 504 aaKnown RBP12.84□□□□□ -0.35
USP8-212ENST00000560730 FAXDC2Q96IV6 333 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 MYRFLQ96LU7 910 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 SMOQ99835 787 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
USP8-212ENST00000560730 PATJQ8NI35 1801 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 ZNF318Q5VUA4 2279 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 TRIM66O15016 1216 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 P4HA2O15460 535 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 ECI2O75521 394 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 AP1G2O75843 785 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 CFHP08603 1231 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 SRFP11831 508 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 ANXA13P27216 316 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 ADORA2BP29275 332 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 TXNDC8Q6A555 127 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 VITQ6UXI7 678 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
USP8-212ENST00000560730 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.36
USP8-212ENST00000560730 ARHGEF19Q8IW93 802 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 UBR7Q8N806 425 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 MAB21L3Q8N8X9 362 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 SLC4A11Q8NBS3 891 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 ELSPBP1Q96BH3 223 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 CYFIP2Q96F07 1278 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.36
USP8-212ENST00000560730 NT5C1BQ96P26 610 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 LRRC3BQ96PB8 259 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 HNRNPABQ99729 332 aaKnown RBP12.83□□□□□ -0.36
USP8-212ENST00000560730 CRACR2AQ9BSW2 395 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 GPR88Q9GZN0 384 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 SMG9Q9H0W8 520 aaKnown RBP12.83□□□□□ -0.36
USP8-212ENST00000560730 THAP9Q9H5L6 903 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 TASP1Q9H6P5 420 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 TRPV4Q9HBA0 871 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 SAMSN1Q9NSI8 373 aaKnown RBP12.83□□□□□ -0.36
USP8-212ENST00000560730 DACH1Q9UI36 760 aa12.83□□□□□ -0.36
USP8-212ENST00000560730 COL4A3Q01955 1670 aa12.82□□□□□ -0.36
USP8-212ENST00000560730 PRR33A8MZF0 331 aa12.82□□□□□ -0.36
USP8-212ENST00000560730 TNFRSF10BO14763 440 aa12.82□□□□□ -0.36
USP8-212ENST00000560730 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
USP8-212ENST00000560730 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
USP8-212ENST00000560730 GRM2Q14416 872 aa12.82□□□□□ -0.36
USP8-212ENST00000560730 ARHGAP15Q53QZ3 475 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms