RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 MED10Q9BTT4 135 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 SLC4A5Q9BY07 1137 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 MTIF3Q9H2K0 278 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 ABCB6Q9NP58 842 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 CRTAC1Q9NQ79 661 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 ST7Q9NRC1 585 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 AAASQ9NRG9 546 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 MARCH5Q9NX47 278 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 AMFRQ9UKV5 643 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 COG5Q9UP83 839 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 INSL6Q9Y581 213 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 SAR1BQ9Y6B6 198 aa9.09□□□□□ -0.95
TRAF3-209ENST00000560463 COL4A4P53420 1690 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 HELZP42694 1942 aaKnown RBP9.09□□□□□ -0.95
TRAF3-209ENST00000560463 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 MYBPHLA2RUH7 354 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 OR6C75A6NL08 312 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ZBBXA8MT70 800 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 MIF4GDA9UHW6 222 aaKnown RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 F8W810 466 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 CES2O00748 559 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 FANCGO15287 622 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 HCRTO43612 131 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ATP2C2O75185 946 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 URI1O94763 535 aaPredicted RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 GJB5O95377 273 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 EFEMP2O95967 443 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ATP1A1P05023 1023 aaKnown RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 FAM200BP0CF97 657 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ADORA2BP29275 332 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 TKTP29401 623 aaKnown RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 MAN1A1P33908 653 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 PPM1AP35813 382 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 SLC1A1P43005 524 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 PSMC1P62191 440 aaKnown RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 MAMLD1Q13495 774 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ACAP1Q15027 740 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 NFE2Q16621 373 aaPredicted RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 USP41Q3LFD5 358 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 VARS2Q5ST30 1063 aaKnown RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 SPOUT1Q5T280 376 aaKnown RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 FAM171A1Q5VUB5 890 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ZNF280DQ6N043 979 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 PMF1Q6P1K2 205 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 DCUN1D2Q6PH85 259 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 KCNT2Q6UVM3 1135 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 CLEC20AQ6ZU45 233 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 PAQR9Q6ZVX9 377 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ANKS3Q6ZW76 656 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ARCQ7LC44 396 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 NT5DC3Q86UY8 548 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 FNIP1Q8TF40 1166 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 HERVK_113Q902F9 699 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 MCRS1Q96EZ8 462 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 SMARCD1Q96GM5 515 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 PCED1BQ96HM7 432 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 FUBP3Q96I24 572 aaKnown RBP eCLIP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 IGSF21Q96ID5 467 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ZNF558Q96NG5 402 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 PKMYT1Q99640 499 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 LBHD1Q9BQE6 289 aaPredicted RBP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.08□□□□□ -0.96
TRAF3-209ENST00000560463 TTPALQ9BTX7 342 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 SELENOOQ9BVL4 669 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 TLR10Q9BXR5 811 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 B3GNT5Q9BYG0 378 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 GPR62Q9BZJ7 368 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ZCWPW1Q9H0M4 648 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 L2HGDHQ9H9P8 463 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 CSNK1G1Q9HCP0 422 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 PNPLA8Q9NP80 782 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 IP6K2Q9UHH9 426 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 CDC23Q9UJX2 597 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ANAPC7Q9UJX3 599 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 SNX12Q9UMY4 172 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 HYOU1Q9Y4L1 999 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 ALG6Q9Y672 507 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 SHROOM3Q8TF72 1996 aa9.08□□□□□ -0.96
TRAF3-209ENST00000560463 NUP205Q92621 2012 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 TMEM191CA6NGB0 347 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 E5RJQ4 531 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 ENC1O14682 589 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 AP1G2O75843 785 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 PROSCO94903 275 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 SOD2P04179 222 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 ERBB2P04626 1255 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 KRT3P12035 628 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 DESP17661 470 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 AMPD2Q01433 879 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 SLC6A3Q01959 620 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 PIGHQ14442 188 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-209ENST00000560463 MESDQ14696 234 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 RPS6KA1Q15418 735 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 CFAP221Q4G0U5 840 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 C2CD6Q53TS8 623 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 EFHC1Q5JVL4 640 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 CYP4A22Q5TCH4 519 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 KIAA0319Q5VV43 1072 aa9.07□□□□□ -0.96
TRAF3-209ENST00000560463 VSTM1Q6UX27 236 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms