RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NT5C1AQ9BXI3 368 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 DNAI2Q9GZS0 605 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ABHD16BQ9H3Z7 469 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 RABEP2Q9H5N1 569 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 TUT1Q9H6E5 874 aaKnown RBP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 SYNCQ9H7C4 482 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 RSAD1Q9HA92 442 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 METTL5Q9NRN9 209 aaKnown RBP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 DPP3Q9NY33 737 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 SLC5A4Q9NY91 659 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 DDX20Q9UHI6 824 aaKnown RBP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 AGAP1Q9UPQ3 857 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CCL15-CCL14A0A0B4J2E2 113 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 SLC15A5A6NIM6 579 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 SMIM23A6NLE4 172 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 M0QYV0 167 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 TRIM66O15016 1216 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 ALOX15BO15296 676 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 SNAI1O95863 264 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 TRUB2O95900 331 aaKnown RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 VTNP04004 478 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 MMP3P08254 477 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CYP2C8P10632 490 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 DESP17661 470 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 GPD1P21695 349 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 ADCYAP1R1P41586 468 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 SLCO1A2P46721 670 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 VPS41P49754 854 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 ZNF143P52747 638 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 NDST1P52848 882 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CDH8P55286 799 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 GPS1Q13098 491 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 TFDP2Q14188 446 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CCL15Q16663 113 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 DGKDQ16760 1214 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 QPCTQ16769 361 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 LONRF1Q17RB8 773 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 FAM47CQ5HY64 1035 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 TMEM63BQ5T3F8 832 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 UBAP2Q5T6F2 1119 aaKnown RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 KAZNQ674X7 775 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 VSTM1Q6UX27 236 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 PPP1R21Q6ZMI0 780 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 PIGWQ7Z7B1 504 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 UNC93AQ86WB7 457 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CDR2LQ86X02 465 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 PPIL6Q8IXY8 311 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 KIAA0319LQ8IZA0 1049 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 ARFGAP1Q8N6T3 406 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 ANKS4BQ8N8V4 417 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CCDC197Q8NCU1 140 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 UHMK1Q8TAS1 419 aaKnown RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 MDM1Q8TC05 714 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 STK32AQ8WU08 396 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 TEKT4Q8WW24 435 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 NLRP7Q8WX94 980 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CPB2Q96IY4 423 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 MAML3Q96JK9 1138 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 MS4A4AQ96JQ5 239 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 ZNF668Q96K58 619 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CABS1Q96KC9 395 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 TWNKQ96RR1 684 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 PLCD4Q9BRC7 762 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 FRMD8Q9BZ67 464 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 GCOM2Q9BZD3 368 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 KDM4CQ9H3R0 1056 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 GBA2Q9HCG7 927 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 SAYSD1Q9NPB0 183 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 KLHL11Q9NVR0 708 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 SLC24A2Q9UI40 661 aa8.49□□□□□ -1.05
SMAD3-212ENST00000559937 FARP1Q9Y4F1 1045 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 TRIP12Q14669 1992 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-212ENST00000559937 GOLGA6L7A0A1B0GV03 622 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 SMIM35A0A1B0GVV1 85 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 CFAP69A5D8W1 941 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 BTBD19C9JJ37 291 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 E7ESA3 106 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 SGK1O00141 431 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 XPOTO43592 962 aaKnown RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 GSTA1P08263 222 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ZNF286BP0CG31 522 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 PECAM1P16284 738 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 IL1R2P27930 398 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 MIPP30301 263 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 PHBP35232 272 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ARL4CP56559 192 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 OTUD4Q01804 1114 aaKnown RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 IFT88Q13099 833 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 PDK2Q15119 407 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 NOMO1Q15155 1222 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 ZBTB6Q15916 424 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 KCTD19Q17RG1 926 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 FAM110CQ1W6H9 321 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 TTC31Q49AM3 519 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-212ENST00000559937 PKDCCQ504Y2 493 aa8.48□□□□□ -1.05
SMAD3-212ENST00000559937 MARCH8Q5T0T0 291 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms