RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 GJA1P17302 382 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 PDCP20941 246 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CHMP24386 653 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CRABP2P29373 138 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 TLX1P31314 330 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 GARSP41250 739 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ME1P48163 572 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 LIG3P49916 1009 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 GNAQP50148 359 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 RNF144AP50876 292 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ATP12AP54707 1039 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 EIF3EP60228 445 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ARF3P61204 181 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ARF1P84077 181 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CDC20Q12834 499 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CHIT1Q13231 466 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 SPIDRQ14159 915 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 TRIM25Q14258 630 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ZMYND11Q15326 602 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 PCBP2Q15366 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 STILQ15468 1287 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 FNDC3BQ53EP0 1204 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 TTMPQ5BVD1 217 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 AARS2Q5JTZ9 985 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 VARS2Q5ST30 1063 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 LIN9Q5TKA1 542 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 PIK3R6Q5UE93 754 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 GRAMD4Q6IC98 578 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 TAF2Q6P1X5 1199 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 FAM122CQ6P4D5 195 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 FAM171BQ6P995 826 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 C3orf62Q6ZUJ4 267 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ZNF765Q7L2R6 523 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 KRT25Q7Z3Z0 450 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 PRPF39Q86UA1 669 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 LRRTM4Q86VH4 590 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 SGMS1Q86VZ5 419 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 LRRC6Q86X45 466 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CAMK1DQ8IU85 385 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ARHGAP18Q8N392 663 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 BBS5Q8N3I7 341 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 HDDC3Q8N4P3 179 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 FAM156AQ8NDB6 213 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CCDC112Q8NEF3 446 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 Q8NFD4 153 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 SLC24A4Q8NFF2 622 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 TTLQ8NG68 377 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ZNF461Q8TAF7 563 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ZNF671Q8TAW3 534 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 POC1BQ8TC44 478 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ADAMTS15Q8TE58 950 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ZNF296Q8WUU4 475 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 NANOS1Q8WY41 292 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ZNF669Q96BR6 464 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 SPACA9Q96E40 222 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 EDC3Q96F86 508 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ACSBG1Q96GR2 724 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 METTL2AQ96IZ6 378 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 TAAR9Q96RI9 348 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 LMF1Q96S06 567 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 NUP88Q99567 741 aaPredicted RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 BTBD2Q9BX70 525 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 GBA3Q9H227 469 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CNGB3Q9NQW8 809 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 INTS7Q9NVH2 962 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 ASNSD1Q9NWL6 643 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 MAD2L2Q9UI95 211 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 LRFN2Q9ULH4 789 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 APOBEC2Q9Y235 224 aaKnown RBP6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 CLEC11AQ9Y240 323 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 NAALAD2Q9Y3Q0 740 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 FADS3Q9Y5Q0 445 aa6.22□□□□□ -1.41
HMGN2P47-201ENST00000559378 A0A0A6YYJ9 748 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 RNF103-CHMP3A0A140T963 221 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 DBX1A6NMT0 343 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 SLCO1B7G3V0H7 640 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 H7BY64 318 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 FZD9O00144 591 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 RNF103O00237 685 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 CA12O43570 354 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 TRAPPC3O43617 180 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 AP1G1O43747 822 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 MAN1A2O60476 641 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 PTP4A3O75365 173 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 CBR3O75828 277 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 RBBP9O75884 186 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 LCA5LO95447 670 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 ALDH1A1P00352 501 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 ASLP04424 464 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 SNRPAP09012 282 aaKnown RBP6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 TPBGLP0DKB5 382 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 CCDC192P0DO97 292 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 GAAP10253 952 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 RARBP10826 455 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 GNAT1P11488 350 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 CD46P15529 392 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 PSMA2P25787 234 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 HMOX2P30519 316 aa6.21□□□□□ -1.42
HMGN2P47-201ENST00000559378 L1CAMP32004 1257 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms