RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PTDSS1P48651 473 aaKnown RBP15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 BMPR2Q13873 1038 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 TAF12Q16514 161 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZNF384Q8TF68 577 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 EME1Q96AY2 570 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 VCPIP1Q96JH7 1222 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 NACA2Q9H009 215 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 CDY2AQ9Y6F7 541 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 CDY1Q9Y6F8 540 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ATP4AP20648 1035 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ORC1Q13415 861 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLC25A41Q8N5S1 370 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 EMC1Q8N766 993 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZNF606Q8WXB4 792 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 GPRASP2Q96D09 838 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZNF518BQ9C0D4 1074 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 FAM49AQ9H0Q0 323 aaPredicted RBP15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 M0R2N6 131 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 MGRN1O60291 552 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ADRB2P07550 413 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 ETS1P14921 441 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 SLC12A1Q13621 1099 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 MXD4Q14582 209 aaPredicted RBP15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 SUPT20HL1Q3ZLR7 823 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 SHC3Q92529 594 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 NRBF2Q96F24 287 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 DTNAQ9Y4J8 743 aa15.65■□□□□ 0.1
ARHGEF40-207ENST00000556399 LSM8O95777 96 aaKnown RBP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 GH1P01241 217 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 ATP6V1B1P15313 513 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 CDK16Q00536 496 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 VPS72Q15906 364 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 PDK4Q16654 411 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 OLFML2BQ68BL8 750 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 LRRC8EQ6NSJ5 796 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 SLFN11Q7Z7L1 901 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 PALB2Q86YC2 1186 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 PIK3R5Q8WYR1 880 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 APOPT1Q96IL0 206 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 HSD17B14Q9BPX1 270 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 WDR18Q9BV38 432 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 TCRBV7S2A1N4TA0A589 114 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 GYS1P13807 737 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 IL1RL1Q01638 556 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 APOBEC3HQ6NTF7 200 aaKnown RBP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 XRRA1Q6P2D8 792 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 LCA5Q86VQ0 697 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 PRPF31Q8WWY3 499 aaKnown RBP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 ZNF408Q9H9D4 720 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 KCNQ5Q9NR82 932 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 DNAJC16Q9Y2G8 782 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 DGKIO75912 1065 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 OATP04181 439 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 HNRNPCP07910 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 TCN1P20061 433 aaPredicted RBP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 SKIV2L2P42285 1042 aaKnown RBP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 PEX5P50542 639 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 ITPRIPL1Q6GPH6 555 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 BEST2Q8NFU1 509 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 TEX13BQ9BXU2 312 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 XAB2Q9HCS7 855 aaKnown RBP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 CISHQ9NSE2 258 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 ARHGAP26Q9UNA1 814 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 MED1Q15648 1581 aaPredicted RBP15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 SLURP2P0DP57 97 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 TTC27Q6P3X3 843 aa15.64■□□□□ 0.09
ARHGEF40-207ENST00000556399 FKBP6O75344 327 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 ABHD2P08910 425 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 SPRP35270 261 aaPredicted RBP15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 BTKQ06187 659 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 EFHC1Q5JVL4 640 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 RNF135Q8IUD6 432 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 SPATA33Q96N06 139 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 PCDHB18PQ96TA0 734 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 FSD1LQ9BXM9 530 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 IL1RAPL1Q9NZN1 696 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 C5orf60A6NFR6 353 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 RGL2O15211 777 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 PSMG1O95456 288 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 ALADP13716 330 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 EEF1DP29692 281 aaKnown RBP15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 BNIP1Q12981 228 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 BOLA3Q53S33 107 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 CXorf38Q8TB03 319 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 MKL1Q969V6 931 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 TASP1Q9H6P5 420 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 SCAF8Q9UPN6 1271 aaKnown RBP15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 KBTBD13C9JR72 458 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 PFDN6O15212 129 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 GLRA3O75311 464 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 FLOT2Q14254 428 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 STILQ15468 1287 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 MAPRE2Q15555 327 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 ATF7IP2Q5U623 682 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 C4orf22Q6V702 233 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 MAP4K3Q8IVH8 894 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms