RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GTPBP4Q9BZE4 634 aaKnown RBP14.57□□□□□ -0.08
SNX6-203ENST00000555416 DENND4CQ5VZ89 1909 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 SHISA7A6NL88 538 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 HEPACAM2A8MVW5 462 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 CSH1P0DML2 217 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 CSH2P0DML3 217 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 CCDC130P13994 396 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 GRIK1P39086 918 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 STIM1Q13586 685 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 MAPRE1Q15691 268 aaKnown RBP14.56□□□□□ -0.08
SNX6-203ENST00000555416 TAF12Q16514 161 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 TCERG1LQ5VWI1 586 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 TXNDC8Q6A555 127 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 FILIP1Q7Z7B0 1213 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 C12orf29Q8N999 325 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 KCNK16Q96T55 309 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 NIF3L1Q9GZT8 377 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 TASP1Q9H6P5 420 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 RAB20Q9NX57 234 aa14.56□□□□□ -0.08
SNX6-203ENST00000555416 ARMCX3Q9UH62 379 aaPredicted RBP14.56□□□□□ -0.08
SNX6-203ENST00000555416 BEST1O76090 585 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 FGF19O95750 216 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 CD58P19256 250 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 CDC25CP30307 473 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 INCA1Q0VD86 236 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 PAK1Q13153 545 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 ASTLQ6HA08 431 aaPredicted RBP14.55□□□□□ -0.08
SNX6-203ENST00000555416 VSTM1Q6UX27 236 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 FAM35AQ86V20 835 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 SUGP1Q8IWZ8 645 aaKnown RBP14.55□□□□□ -0.08
SNX6-203ENST00000555416 CRYBG2Q8N1P7 616 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 MAB21L3Q8N8X9 362 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 FBXL13Q8NEE6 735 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 PRSS33Q8NF86 280 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 TRMT2BQ96GJ1 504 aaKnown RBP14.55□□□□□ -0.08
SNX6-203ENST00000555416 SPATA17Q96L03 361 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 CEP63Q96MT8 703 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 SLC22A12Q96S37 553 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 GPR88Q9GZN0 384 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 ELOVL4Q9GZR5 314 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 MFSD1Q9H3U5 465 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 TBC1D17Q9HA65 648 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 ARHGEF3Q9NR81 526 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 FAM49BQ9NUQ9 324 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 CCL26Q9Y258 94 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 COQ4Q9Y3A0 265 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 COL4A2P08572 1712 aa14.55□□□□□ -0.08
SNX6-203ENST00000555416 C2orf78A6NCI8 922 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 CILPO75339 1184 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 P4HA1P13674 534 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 PSMC3P17980 439 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 CD72P21854 359 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 GDI1P31150 447 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 PPP1R2P41236 205 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 SLC44A4Q53GD3 710 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 ARHGAP15Q53QZ3 475 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 FOXR2Q6PJQ5 311 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 FRMD5Q7Z6J6 570 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 MFSD6LQ8IWD5 586 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 TRIML1Q8N9V2 468 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 ZMIZ2Q8NF64 920 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 GPT2Q8TD30 523 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 ZFYVE19Q96K21 471 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 C8orf48Q96LL4 319 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 CYP2S1Q96SQ9 504 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 SMOQ99835 787 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 TRMT61BQ9BVS5 477 aaKnown RBP14.54□□□□□ -0.08
SNX6-203ENST00000555416 SRRTQ9BXP5 876 aaKnown RBP14.54□□□□□ -0.08
SNX6-203ENST00000555416 FOXQ1Q9C009 403 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 HEBP1Q9NRV9 189 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 HCN4Q9Y3Q4 1203 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 MTF2Q9Y483 593 aaPredicted RBP14.54□□□□□ -0.08
SNX6-203ENST00000555416 NUP210Q8TEM1 1887 aaPredicted RBP14.54□□□□□ -0.08
SNX6-203ENST00000555416 ANAPC1Q9H1A4 1944 aa14.54□□□□□ -0.08
SNX6-203ENST00000555416 ARNTLO00327 626 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 STX10O60499 249 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 CLCN5P51795 746 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 LRMPQ12912 555 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 CCDC40Q4G0X9 1142 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 ZNF394Q53GI3 561 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 MON1AQ86VX9 555 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 UNC93AQ86WB7 457 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 CMTM8Q8IZV2 173 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 SCAMP5Q8TAC9 235 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 SLC2A14Q8TDB8 520 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 USP13Q92995 863 aaPredicted RBP14.53□□□□□ -0.08
SNX6-203ENST00000555416 TNIP3Q96KP6 325 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 GCNAQ96QF7 691 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 MED10Q9BTT4 135 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 TTLL2Q9BWV7 592 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 IMPG2Q9BZV3 1241 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 BRD9Q9H8M2 597 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 CYP3A43Q9HB55 503 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 KRT82Q9NSB4 513 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 GCNT4Q9P109 453 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 TICRRQ7Z2Z1 1910 aa14.53□□□□□ -0.08
SNX6-203ENST00000555416 BICDL2A1A5D9 508 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms