RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 AFPP02771 609 aaKnown RBP12.86□□□□□ -0.35
SRP54-206ENST00000555317 CFHP08603 1231 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 TBXAS1P24557 533 aaPredicted RBP12.86□□□□□ -0.35
SRP54-206ENST00000555317 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.35
SRP54-206ENST00000555317 AVPR1AP37288 418 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 CYP4F8P98187 520 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 PFKPQ01813 784 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 INCA1Q0VD86 236 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 DPCR1Q3MIW9 517 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 GAREM2Q75VX8 874 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 FAM35AQ86V20 835 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 YAF2Q8IY57 180 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 STKLD1Q8NE28 680 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 TRMT2BQ96GJ1 504 aaKnown RBP12.86□□□□□ -0.35
SRP54-206ENST00000555317 CNOT6LQ96LI5 555 aaKnown RBP12.86□□□□□ -0.35
SRP54-206ENST00000555317 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 LRRC3Q9BY71 257 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 B3GNT5Q9BYG0 378 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 ZNF518BQ9C0D4 1074 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 FAM124BQ9H5Z6 455 aaPredicted RBP12.86□□□□□ -0.35
SRP54-206ENST00000555317 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
SRP54-206ENST00000555317 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 FAM49BQ9NUQ9 324 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 NME7Q9Y5B8 376 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 DENND4CQ5VZ89 1909 aa12.86□□□□□ -0.35
SRP54-206ENST00000555317 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
SRP54-206ENST00000555317 CLDN5O00501 218 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 STK25O00506 426 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 P4HA2O15460 535 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 CILPO75339 1184 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 MOSPD3O75425 235 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 AP1G2O75843 785 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 FAM200BP0CF97 657 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 CCDC130P13994 396 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 HMGA1P17096 107 aaKnown RBP12.85□□□□□ -0.35
SRP54-206ENST00000555317 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
SRP54-206ENST00000555317 ADORA2BP29275 332 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 MTIF2P46199 727 aaKnown RBP12.85□□□□□ -0.35
SRP54-206ENST00000555317 KCNH2Q12809 1159 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 IFRD2Q12894 506 aaPredicted RBP12.85□□□□□ -0.35
SRP54-206ENST00000555317 LRMPQ12912 555 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 TANGO2Q6ICL3 276 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 SASS6Q6UVJ0 657 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 HFE2Q6ZVN8 426 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 SLC2A14Q8TDB8 520 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 ZSWIM3Q96MP5 696 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 NT5C1BQ96P26 610 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 TRPC7Q9HCX4 862 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 C11orf16Q9NQ32 467 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 GREB1Q4ZG55 1949 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 OBSL1O75147 1896 aa12.85□□□□□ -0.35
SRP54-206ENST00000555317 PMM2O15305 246 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 RTN3O95197 1032 aaPredicted RBP12.84□□□□□ -0.35
SRP54-206ENST00000555317 PSMC3P17980 439 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 PDE6CP51160 858 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
SRP54-206ENST00000555317 CUL2Q13617 745 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
SRP54-206ENST00000555317 STXBP5Q5T5C0 1151 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 SIX5Q8N196 739 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 CRYBG2Q8N1P7 616 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 PPM1KQ8N3J5 372 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 ASIC4Q96FT7 647 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 MYRFLQ96LU7 910 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 HEXIM2Q96MH2 286 aaKnown RBP12.84□□□□□ -0.35
SRP54-206ENST00000555317 SLITRK1Q96PX8 696 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 ARID3AQ99856 593 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 RPP25Q9BUL9 199 aaKnown RBP12.84□□□□□ -0.35
SRP54-206ENST00000555317 TRMT61BQ9BVS5 477 aaKnown RBP12.84□□□□□ -0.35
SRP54-206ENST00000555317 THAP9Q9H5L6 903 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 BRD9Q9H8M2 597 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 TRPV4Q9HBA0 871 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 IL21Q9HBE4 155 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 SLC2A4RGQ9NR83 387 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 WNT16Q9UBV4 365 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 CA14Q9ULX7 337 aa12.84□□□□□ -0.35
SRP54-206ENST00000555317 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 SOBPA7XYQ1 873 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 HEPACAM2A8MVW5 462 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
SRP54-206ENST00000555317 NRG2O14511 850 aaPredicted RBP12.83□□□□□ -0.36
SRP54-206ENST00000555317 LRRN2O75325 713 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 F11P03951 625 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 CKMP06732 381 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 FCARP24071 287 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 VIPR2P41587 438 aa12.83□□□□□ -0.36
SRP54-206ENST00000555317 PPP3CCP48454 512 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms