RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ANTXR1Q9H6X2 564 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PNMA6AP0CW24 399 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 DNAJB2P25686 324 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 UTP15Q8TED0 518 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 RSPH1Q8WYR4 309 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 FBXO32Q969P5 355 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SLC9A7Q96T83 725 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 MAP1BP46821 2468 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 F5H5T6 163 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SCGNO76038 276 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PDGFRAP16234 1089 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF24P17028 368 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ARF4P18085 180 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PRCPP42785 496 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ITGADQ13349 1161 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 TRIM51Q9BSJ1 452 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 CIPCQ9C0C6 399 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 RAD21L1Q9H4I0 556 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 WDR62O43379 1518 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 STX7O15400 261 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZW10O43264 779 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF189O75820 626 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 GH1P01241 217 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 FAM200BP0CF97 657 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 HSD3B2P26439 372 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 HSPA9P38646 679 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SLC11A2P49281 568 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PRKAA1Q13131 559 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 CDC73Q6P1J9 531 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 FOXP4Q8IVH2 680 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 KIF2BQ8N4N8 673 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 USP7Q93009 1102 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 VPS28Q9UK41 221 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SH3BGRLO75368 114 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SERPINB5P36952 375 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PUDPQ08623 228 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 EMC2Q15006 297 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF669Q96BR6 464 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 VTA1Q9NP79 307 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SCAF8Q9UPN6 1271 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 TFE3P19532 575 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PDHA2P29803 388 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 MAGEA10P43363 369 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 EPHB3P54753 998 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 OXCT1P55809 520 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SLC30A9Q6PML9 568 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PACS1Q6VY07 963 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 DHX40Q8IX18 779 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 UBA3Q8TBC4 463 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 GPRASP2Q96D09 838 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ARMC7Q9H6L4 198 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 FANCEQ9HB96 536 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 RAB23Q9ULC3 237 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 TRIM24O15164 1050 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PIK3C2GO75747 1445 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 DDI1Q8WTU0 396 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 GMCL1Q96IK5 515 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PRKAG3Q9UGI9 489 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 NUP160Q12769 1436 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 H7C4K7 107 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 IGFBP4P22692 258 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PCSK1P29120 753 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 LONRF1Q17RB8 773 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 MROH9Q5TGP6 573 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PRAMEF18Q5VWM3 479 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 POTEAQ6S8J7 498 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PROM2Q8N271 834 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 RMND5AQ9H871 391 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZSWIM5Q9P217 1185 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 DUSP12Q9UNI6 340 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF500O60304 480 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 MFN2O95140 757 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 IL18RAPO95256 599 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 CKMP06732 381 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 PRR29P0C7W0 189 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SERPINH1P50454 418 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF200P98182 395 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 DMTNQ08495 405 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ACOX1Q15067 660 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF57Q68EA5 555 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 GPR141Q7Z602 305 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 MIB1Q86YT6 1006 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 KLF6Q99612 283 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 KATNAL1Q9BW62 490 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 CCDC134Q9H6E4 229 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 INTS13Q9NVM9 706 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 IDH3BO43837 385 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 GGPS1O95749 300 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 PROSER1Q86XN7 944 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 NEK7Q8TDX7 302 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 CLEC4MQ9H2X3 399 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-216ENST00000555002 VIPAS39Q9H9C1 493 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 ABHD10Q9NUJ1 306 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 RUVBL2Q9Y230 463 aaKnown RBP7.12□□□□□ -1.27
SYNE2-216ENST00000555002 TBX3O15119 743 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 ACSL4O60488 711 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 OR6A2O95222 327 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 CYP2C9P11712 490 aa7.12□□□□□ -1.27
SYNE2-216ENST00000555002 SKIV2L2P42285 1042 aaKnown RBP7.12□□□□□ -1.27
SYNE2-216ENST00000555002 TTLL9Q3SXZ7 439 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms