RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 MFSD6LQ8IWD5 586 aa20.55■□□□□ 0.88
PTCH1-227ENST00000553256 SUGP1Q8IWZ8 645 aaKnown RBP20.55■□□□□ 0.88
PTCH1-227ENST00000553256 RIN3Q8TB24 985 aa20.55■□□□□ 0.88
PTCH1-227ENST00000553256 FAXDC2Q96IV6 333 aa20.55■□□□□ 0.88
PTCH1-227ENST00000553256 OBP2AQ9NY56 170 aa20.55■□□□□ 0.88
PTCH1-227ENST00000553256 CA14Q9ULX7 337 aa20.55■□□□□ 0.88
PTCH1-227ENST00000553256 F5P12259 2224 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 NUP210Q8TEM1 1887 aaPredicted RBP20.54■□□□□ 0.88
PTCH1-227ENST00000553256 HEPACAM2A8MVW5 462 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 CLDN5O00501 218 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 PSMA7O14818 248 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 EPB41P11171 864 aaKnown RBP20.54■□□□□ 0.88
PTCH1-227ENST00000553256 PSMC3P17980 439 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 PPP1R2P41236 205 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 PIK3CAP42336 1068 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 NUBP1P53384 320 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 SLC44A4Q53GD3 710 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 GPR158Q5T848 1215 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 FILIP1Q7Z7B0 1213 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 UNC93AQ86WB7 457 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 FUKQ8N0W3 1084 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 TRIML1Q8N9V2 468 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 FAM200AQ8TCP9 573 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 DEPDC1BQ8WUY9 529 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 DNASE1L2Q92874 299 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 CEP63Q96MT8 703 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 TSG101Q99816 390 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 IL37Q9NZH6 218 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 FBXL21Q9UKT6 434 aa20.54■□□□□ 0.88
PTCH1-227ENST00000553256 KIF26AQ9ULI4 1882 aaPredicted RBP20.54■□□□□ 0.88
PTCH1-227ENST00000553256 F8VP50 259 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 BIN1O00499 593 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 TNFRSF10BO14763 440 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 PMM2O15305 246 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 MXI1P50539 228 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 NDST1P52848 882 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 CYP27A1Q02318 531 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 GRM2Q14416 872 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 MON1AQ86VX9 555 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 ZMIZ2Q8NF64 920 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 E2F7Q96AV8 911 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 ELOVL4Q9GZR5 314 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 NIF3L1Q9GZT8 377 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 TBC1D17Q9HA65 648 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 CYP3A43Q9HB55 503 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 LMBRD1Q9NUN5 540 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 RAB20Q9NX57 234 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 GCNT4Q9P109 453 aa20.53■□□□□ 0.88
PTCH1-227ENST00000553256 CILPO75339 1184 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 GLULP15104 373 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 DDX6P26196 483 aaKnown RBP eCLIP20.52■□□□□ 0.88
PTCH1-227ENST00000553256 MARSP56192 900 aaKnown RBP20.52■□□□□ 0.88
PTCH1-227ENST00000553256 PFKPQ01813 784 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 PRKCQQ04759 706 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 FZD5Q13467 585 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 MLF2Q15773 248 aaPredicted RBP20.52■□□□□ 0.88
PTCH1-227ENST00000553256 TXNDC8Q6A555 127 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 FRMD5Q7Z6J6 570 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 FAM35AQ86V20 835 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 SCN4BQ8IWT1 228 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 CMTM8Q8IZV2 173 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 FBXL13Q8NEE6 735 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 NELFBQ8WX92 580 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 SLC22A12Q96S37 553 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 TRMT61BQ9BVS5 477 aaKnown RBP20.52■□□□□ 0.88
PTCH1-227ENST00000553256 CSNK1G1Q9HCP0 422 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 ZMYM5Q9UJ78 669 aa20.52■□□□□ 0.88
PTCH1-227ENST00000553256 FAM92AA1XBS5 289 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 P4HA1P13674 534 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 ORC1Q13415 861 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 CAMK4Q16566 473 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 DENND5BQ6ZUT9 1274 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 ACOT1Q86TX2 421 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 GPIHBP1Q8IV16 184 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 UBR7Q8N806 425 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 FLCNQ8NFG4 579 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 LMO3Q8TAP4 145 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 USP13Q92995 863 aaPredicted RBP20.51■□□□□ 0.87
PTCH1-227ENST00000553256 TATDN2Q93075 761 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 SMG9Q9H0W8 520 aaKnown RBP20.51■□□□□ 0.87
PTCH1-227ENST00000553256 CLSTN2Q9H4D0 955 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 MMRN2Q9H8L6 949 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTCH1-227ENST00000553256 UXTQ9UBK9 157 aaPredicted RBP20.51■□□□□ 0.87
PTCH1-227ENST00000553256 ARMCX3Q9UH62 379 aaPredicted RBP20.51■□□□□ 0.87
PTCH1-227ENST00000553256 CCL26Q9Y258 94 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 ANAPC1Q9H1A4 1944 aa20.51■□□□□ 0.87
PTCH1-227ENST00000553256 TRIM66O15016 1216 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 BEST1O76090 585 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 GRIK1P39086 918 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 STIM1Q13586 685 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 ZNF268Q14587 947 aaPredicted RBP20.5■□□□□ 0.87
PTCH1-227ENST00000553256 ARHGAP15Q53QZ3 475 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 KLHL10Q6JEL2 608 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 C12orf29Q8N999 325 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 TNIP3Q96KP6 325 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 KCNK16Q96T55 309 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 SMOQ99835 787 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 ARID3AQ99856 593 aa20.5■□□□□ 0.87
PTCH1-227ENST00000553256 SLITRK6Q9H5Y7 841 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms