RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 ATP2C2O75185 946 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 C1RP00736 705 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 CALCAP01258 141 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 CYP1A2P05177 515 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 CCDC130P13994 396 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 ADORA2BP29275 332 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 CTNNB1P35222 781 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 MAGEA11P43364 429 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 RPL34P49207 117 aaKnown RBP10.99□□□□□ -0.65
NEK3-203ENST00000551355 HADHBP55084 474 aaKnown RBP10.99□□□□□ -0.65
NEK3-203ENST00000551355 PDCLQ13371 301 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 ZNF268Q14587 947 aaPredicted RBP10.99□□□□□ -0.65
NEK3-203ENST00000551355 PTPN14Q15678 1187 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 RTP2Q5QGT7 225 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 KIAA0319Q5VV43 1072 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 TPGS2Q68CL5 300 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 PDE12Q6L8Q7 609 aaKnown RBP10.99□□□□□ -0.65
NEK3-203ENST00000551355 TMEM110Q86TL2 294 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 FAM35AQ86V20 835 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 TTC30AQ86WT1 665 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 VPS52Q8N1B4 723 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 WDTC1Q8N5D0 677 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 FBXO22Q8NEZ5 403 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 UBA3Q8TBC4 463 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 SPPL2BQ8TCT7 592 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 KCTD13Q8WZ19 329 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 SECISBP2LQ93073 1101 aaKnown RBP10.99□□□□□ -0.65
NEK3-203ENST00000551355 MYLPFQ96A32 169 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 ZNF653Q96CK0 615 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 ALS2CR12Q96Q35 445 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 SLC4A5Q9BY07 1137 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 CSNK1G1Q9HCP0 422 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 DMAP1Q9NPF5 467 aaPredicted RBP10.99□□□□□ -0.65
NEK3-203ENST00000551355 LZTFL1Q9NQ48 299 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 TAS2R14Q9NYV8 317 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 FNIP2Q9P278 1114 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 MSRAQ9UJ68 235 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 TRIP11Q15643 1979 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 FNDC1Q4ZHG4 1894 aaPredicted RBP10.98□□□□□ -0.65
NEK3-203ENST00000551355 H0YGN5 161 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 TRIM66O15016 1216 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 SART1O43290 800 aaKnown RBP10.98□□□□□ -0.65
NEK3-203ENST00000551355 HCRTO43612 131 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 LPXNO60711 386 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 AP1G2O75843 785 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 MTA2O94776 668 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 FBXO21O94952 628 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 CFHP08603 1231 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 CTSAP10619 480 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 CPB1P15086 417 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 ABCB4P21439 1286 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 SCNN1AP37088 669 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 ARHGAP25P42331 645 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 PDE4CQ08493 712 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 SLC39A12Q504Y0 691 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 MMS22LQ6ZRQ5 1243 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 PAQR9Q6ZVX9 377 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 TAS1R1Q7RTX1 841 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 LRRTM3Q86VH5 581 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 SYCE1Q8N0S2 351 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 KLHL23Q8NBE8 558 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 C3orf20Q8ND61 904 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 TRIM58Q8NG06 486 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 TGS1Q96RS0 853 aaKnown RBP10.98□□□□□ -0.65
NEK3-203ENST00000551355 VN1R3Q9BXE9 311 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 LACRTQ9GZZ8 138 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 THAP2Q9H0W7 228 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 RXFP1Q9HBX9 757 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 NGRNQ9NPE2 291 aaKnown RBP10.98□□□□□ -0.65
NEK3-203ENST00000551355 ST7Q9NRC1 585 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 KRT82Q9NSB4 513 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 CNOT8Q9UFF9 292 aaKnown RBP10.98□□□□□ -0.65
NEK3-203ENST00000551355 GUCA1BQ9UMX6 200 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 IRAK3Q9Y616 596 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 NCANO14594 1321 aa10.98□□□□□ -0.65
NEK3-203ENST00000551355 MKI67P46013 3256 aaKnown RBP10.98□□□□□ -0.65
NEK3-203ENST00000551355 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 USP27XA6NNY8 438 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 DESP17661 470 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 NOP2P46087 812 aaKnown RBP10.97□□□□□ -0.65
NEK3-203ENST00000551355 TUFMP49411 452 aaKnown RBP10.97□□□□□ -0.65
NEK3-203ENST00000551355 NDUFV1P49821 464 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 NAP1L1P55209 391 aaKnown RBP10.97□□□□□ -0.65
NEK3-203ENST00000551355 ERVK-21P61565 698 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 RPL10AP62906 217 aaKnown RBP10.97□□□□□ -0.65
NEK3-203ENST00000551355 PTP4A2Q12974 167 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 RAB33AQ14088 237 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 PTPN20Q4JDL3 420 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 PLEKHA7Q6IQ23 1121 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 CLEC20AQ6ZU45 233 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 TDHQ8IZJ6 230 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 SCML4Q8N228 414 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 ZNF461Q8TAF7 563 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 SLC35G2Q8TBE7 412 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 C8orf48Q96LL4 319 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 CPXM1Q96SM3 734 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 C11orf70Q9BRQ4 267 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 TRIM62Q9BVG3 475 aa10.97□□□□□ -0.65
NEK3-203ENST00000551355 EMILIN2Q9BXX0 1053 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms