RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 USP46P62068 366 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 PAK1Q13153 545 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 TXNDC8Q6A555 127 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 ASTLQ6HA08 431 aaPredicted RBP16.8■□□□□ 0.28
DDX54-205ENST00000548786 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 TRMT61BQ9BVS5 477 aaKnown RBP16.8■□□□□ 0.28
DDX54-205ENST00000548786 NIF3L1Q9GZT8 377 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 BRD9Q9H8M2 597 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 KIAA1468Q9P260 1216 aa16.8■□□□□ 0.28
DDX54-205ENST00000548786 DPYSL4O14531 572 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 STX10O60499 249 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 TADA3O75528 432 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 NOL4O94818 638 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 F11P03951 625 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 CD72P21854 359 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 GTF2H1P32780 548 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 VSTM1Q6UX27 236 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 FAM35AQ86V20 835 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 C12orf29Q8N999 325 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 MRPS31Q92665 395 aaKnown RBP16.79■□□□□ 0.28
DDX54-205ENST00000548786 TNIP3Q96KP6 325 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 TWNKQ96RR1 684 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 ARID3AQ99856 593 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 SLC46A2Q9BY10 475 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 BCO2Q9BYV7 579 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 FOXQ1Q9C009 403 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 GPR88Q9GZN0 384 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 ELOVL4Q9GZR5 314 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 CLSTN2Q9H4D0 955 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 TASP1Q9H6P5 420 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 HEBP1Q9NRV9 189 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 KRT82Q9NSB4 513 aa16.79■□□□□ 0.28
DDX54-205ENST00000548786 OBSL1O75147 1896 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 BICDL2A1A5D9 508 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 TRIM66O15016 1216 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 FAM163BP0C2L3 166 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 PSMC3P17980 439 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 ADORA2BP29275 332 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 PPP1R2P41236 205 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 ENPEPQ07075 957 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 LRMPQ12912 555 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 MLF2Q15773 248 aaPredicted RBP16.78■□□□□ 0.28
DDX54-205ENST00000548786 SLC44A4Q53GD3 710 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 ZNF394Q53GI3 561 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 YAF2Q8IY57 180 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 SLC35C1Q96A29 364 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 ZFYVE19Q96K21 471 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 IPO9Q96P70 1041 aaKnown RBP16.78■□□□□ 0.28
DDX54-205ENST00000548786 LRRC3BQ96PB8 259 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 TRPV4Q9HBA0 871 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 RAB20Q9NX57 234 aa16.78■□□□□ 0.28
DDX54-205ENST00000548786 ATP8B3O60423 1300 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 ZNF263O14978 683 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 AP1G2O75843 785 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 AVPR1AP37288 418 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 PFKPQ01813 784 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 WDR44Q5JSH3 913 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 TPRG1Q6ZUI0 275 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 DENND5BQ6ZUT9 1274 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 PAQR9Q6ZVX9 377 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 CREBRFQ8IUR6 639 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 CMTM8Q8IZV2 173 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 FUKQ8N0W3 1084 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 PRSS33Q8NF86 280 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 SLC2A14Q8TDB8 520 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 TATDN2Q93075 761 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 TRMT2BQ96GJ1 504 aaKnown RBP16.77■□□□□ 0.28
DDX54-205ENST00000548786 SPATA17Q96L03 361 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 CEP63Q96MT8 703 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 KCNK16Q96T55 309 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 LMBRD1Q9NUN5 540 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 UXTQ9UBK9 157 aaPredicted RBP16.77■□□□□ 0.28
DDX54-205ENST00000548786 CCL26Q9Y258 94 aa16.77■□□□□ 0.28
DDX54-205ENST00000548786 NUP210Q8TEM1 1887 aaPredicted RBP16.77■□□□□ 0.27
DDX54-205ENST00000548786 TICRRQ7Z2Z1 1910 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 C2orf78A6NCI8 922 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 ABL1P00519 1130 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 DCNP07585 359 aaKnown RBP16.76■□□□□ 0.27
DDX54-205ENST00000548786 AOC1P19801 751 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 UBXN2BQ14CS0 331 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 FRMD5Q7Z6J6 570 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 FILIP1Q7Z7B0 1213 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 MFSD6LQ8IWD5 586 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 TRIML1Q8N9V2 468 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 DEPDC1BQ8WUY9 529 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 C8orf48Q96LL4 319 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 MYRFLQ96LU7 910 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 SLC22A12Q96S37 553 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 CYP2S1Q96SQ9 504 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
DDX54-205ENST00000548786 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
DDX54-205ENST00000548786 METTL14Q9HCE5 456 aaKnown RBP16.76■□□□□ 0.27
DDX54-205ENST00000548786 GREB1Q4ZG55 1949 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 DENND4CQ5VZ89 1909 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 CKMP06732 381 aa16.75■□□□□ 0.27
DDX54-205ENST00000548786 FMO5P49326 533 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms