RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 F8VP50 259 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 TADA3O75528 432 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 VIPR2P41587 438 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 GPC5P78333 572 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 INCA1Q0VD86 236 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 BMP8AQ7Z5Y6 402 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 UNC93AQ86WB7 457 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 GPIHBP1Q8IV16 184 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 SUGP1Q8IWZ8 645 aaKnown RBP12.58□□□□□ -0.4
RAB5C-204ENST00000547517 MLKLQ8NB16 471 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 TWNKQ96RR1 684 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 ARID3AQ99856 593 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 SRRTQ9BXP5 876 aaKnown RBP12.58□□□□□ -0.4
RAB5C-204ENST00000547517 GPR88Q9GZN0 384 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 MFSD1Q9H3U5 465 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 CYP3A43Q9HB55 503 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 FAM49BQ9NUQ9 324 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 TMEM30AQ9NV96 361 aa12.58□□□□□ -0.4
RAB5C-204ENST00000547517 UXTQ9UBK9 157 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-204ENST00000547517 FGFR1OPO95684 399 aaKnown RBP12.57□□□□□ -0.4
RAB5C-204ENST00000547517 GNA14O95837 355 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 CCDC192P0DO97 292 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
RAB5C-204ENST00000547517 FMO5P49326 533 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 IFRD2Q12894 506 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-204ENST00000547517 LRMPQ12912 555 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 VITQ6UXI7 678 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 DENND5BQ6ZUT9 1274 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 FUKQ8N0W3 1084 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 FBXL6Q8N531 539 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 FLCNQ8NFG4 579 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 SLC2A14Q8TDB8 520 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 MRPS31Q92665 395 aaKnown RBP12.57□□□□□ -0.4
RAB5C-204ENST00000547517 TRMT2BQ96GJ1 504 aaKnown RBP12.57□□□□□ -0.4
RAB5C-204ENST00000547517 SMARCD1Q96GM5 515 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 C8orf48Q96LL4 319 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 NT5C1AQ9BXI3 368 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 SMG9Q9H0W8 520 aaKnown RBP12.57□□□□□ -0.4
RAB5C-204ENST00000547517 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 ARHGEF3Q9NR81 526 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 SLC2A4RGQ9NR83 387 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 COQ4Q9Y3A0 265 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 HCN4Q9Y3Q4 1203 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 OBSL1O75147 1896 aa12.57□□□□□ -0.4
RAB5C-204ENST00000547517 NUP210Q8TEM1 1887 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-204ENST00000547517 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 HEPACAM2A8MVW5 462 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 CILPO75339 1184 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 AP1G2O75843 785 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 PRAMEF12O95522 483 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 F11P03951 625 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 RFX1P22670 979 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 ADORA2BP29275 332 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
RAB5C-204ENST00000547517 USP46P62068 366 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 ZNF394Q53GI3 561 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 CREBRFQ8IUR6 639 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 ARID3BQ8IVW6 561 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-204ENST00000547517 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 MAB21L3Q8N8X9 362 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 C12orf29Q8N999 325 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 TATDN2Q93075 761 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 RSPRY1Q96DX4 576 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 CNOT6LQ96LI5 555 aaKnown RBP12.56□□□□□ -0.4
RAB5C-204ENST00000547517 MYRFLQ96LU7 910 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 MED15Q96RN5 788 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 TRPV4Q9HBA0 871 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 TRPC7Q9HCX4 862 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 DMAP1Q9NPF5 467 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-204ENST00000547517 CISHQ9NSE2 258 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 DACH1Q9UI36 760 aa12.56□□□□□ -0.4
RAB5C-204ENST00000547517 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAB5C-204ENST00000547517 KMT2EQ8IZD2 1858 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 COL4A3Q01955 1670 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 DPYSL4O14531 572 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
RAB5C-204ENST00000547517 PSMC3P17980 439 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAB5C-204ENST00000547517 GDI1P31150 447 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 MARSP56192 900 aaKnown RBP12.55□□□□□ -0.4
RAB5C-204ENST00000547517 PFKPQ01813 784 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 KCNH2Q12809 1159 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 CUL2Q13617 745 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 TPD52L1Q16890 204 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-204ENST00000547517 IER5LQ5T953 404 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 CWF19L1Q69YN2 538 aaKnown RBP12.55□□□□□ -0.4
RAB5C-204ENST00000547517 TXNDC8Q6A555 127 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 YAF2Q8IY57 180 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 CMTM8Q8IZV2 173 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 CRYBG2Q8N1P7 616 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 WHAMMQ8TF30 809 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 DEPDC1BQ8WUY9 529 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 JAKMIP2Q96AA8 810 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 FAXDC2Q96IV6 333 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms