RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 SDHAF4Q5VUM1 108 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 ISM2Q6H9L7 571 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 VITQ6UXI7 678 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 TMEM150AQ86TG1 271 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 MFSD6LQ8IWD5 586 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 FBXL13Q8NEE6 735 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 MRPS31Q92665 395 aaKnown RBP16.93■□□□□ 0.3
DDX54-204ENST00000546898 IRF7Q92985 503 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 EEF2KMTQ96G04 330 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 C8orf48Q96LL4 319 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 CEP63Q96MT8 703 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 TRMT61BQ9BVS5 477 aaKnown RBP16.93■□□□□ 0.3
DDX54-204ENST00000546898 BCO2Q9BYV7 579 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 NIF3L1Q9GZT8 377 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 SDCBP2Q9H190 292 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 TBC1D17Q9HA65 648 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 CYP3A43Q9HB55 503 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
DDX54-204ENST00000546898 ARMCX3Q9UH62 379 aaPredicted RBP16.93■□□□□ 0.3
DDX54-204ENST00000546898 CACNA1HO95180 2353 aa16.93■□□□□ 0.3
DDX54-204ENST00000546898 HEPACAM2A8MVW5 462 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 PPP1R3GB7ZBB8 358 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 BMP6P22004 513 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 VIPR2P41587 438 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 STARD6P59095 220 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 INCA1Q0VD86 236 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 GRM2Q14416 872 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 MLF2Q15773 248 aaPredicted RBP16.92■□□□□ 0.3
DDX54-204ENST00000546898 TCERG1LQ5VWI1 586 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 SPOPLQ6IQ16 392 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 DENND5BQ6ZUT9 1274 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 ARID3BQ8IVW6 561 aaPredicted RBP16.92■□□□□ 0.3
DDX54-204ENST00000546898 TMEM105Q8N8V8 129 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 BRD9Q9H8M2 597 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 TRPV5Q9NQA5 729 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 KIAA1468Q9P260 1216 aa16.92■□□□□ 0.3
DDX54-204ENST00000546898 BIN1O00499 593 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 DPYSL4O14531 572 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 TADA3O75528 432 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
DDX54-204ENST00000546898 FCHO2Q0JRZ9 810 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 SLC44A4Q53GD3 710 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 DCAF17Q5H9S7 520 aaPredicted RBP16.91■□□□□ 0.3
DDX54-204ENST00000546898 KLHL10Q6JEL2 608 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 TTI2Q6NXR4 508 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 FRMD5Q7Z6J6 570 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 FAM35AQ86V20 835 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 YAF2Q8IY57 180 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 CMTM8Q8IZV2 173 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 TTC39CQ8N584 583 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 NELFBQ8WX92 580 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 ELMO3Q96BJ8 720 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 DDX23Q9BUQ8 820 aaKnown RBP16.91■□□□□ 0.3
DDX54-204ENST00000546898 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 B3GNT5Q9BYG0 378 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 ZNF518BQ9C0D4 1074 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 DNAI2Q9GZS0 605 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 FAM124BQ9H5Z6 455 aaPredicted RBP16.91■□□□□ 0.3
DDX54-204ENST00000546898 KIF9Q9HAQ2 790 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 APOBEC3GQ9HC16 384 aaKnown RBP16.91■□□□□ 0.3
DDX54-204ENST00000546898 RAB20Q9NX57 234 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 NCANO14594 1321 aa16.91■□□□□ 0.3
DDX54-204ENST00000546898 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 F5P12259 2224 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 F8VP50 259 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 ZNF263O14978 683 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 CHADO15335 359 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 GDI1P31150 447 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 AVPR1AP37288 418 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 NDST1P52848 882 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 PTPN5P54829 565 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 PAK1Q13153 545 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 IER5LQ5T953 404 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 MON1AQ86VX9 555 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 CRYBG2Q8N1P7 616 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 CELF5Q8N6W0 485 aaKnown RBP16.9■□□□□ 0.3
DDX54-204ENST00000546898 PRSS33Q8NF86 280 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 SLC35C1Q96A29 364 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 RSPRY1Q96DX4 576 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 SMARCD1Q96GM5 515 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 DUSP9Q99956 384 aaKnown RBP16.9■□□□□ 0.3
DDX54-204ENST00000546898 SLC46A2Q9BY10 475 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 CTNND2Q9UQB3 1225 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 COQ4Q9Y3A0 265 aa16.9■□□□□ 0.3
DDX54-204ENST00000546898 COL4A3Q01955 1670 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 STK25O00506 426 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 GALR2O43603 387 aaPredicted RBP16.89■□□□□ 0.29
DDX54-204ENST00000546898 PRAMEF12O95522 483 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 PFKLP17858 780 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 PPP3CCP48454 512 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 ZNF268Q14587 947 aaPredicted RBP16.89■□□□□ 0.29
DDX54-204ENST00000546898 CAMK4Q16566 473 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 CCDC40Q4G0X9 1142 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 ARHGAP29Q52LW3 1261 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 ACOT1Q86TX2 421 aa16.89■□□□□ 0.29
DDX54-204ENST00000546898 MAB21L3Q8N8X9 362 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms