RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 BEST2Q8NFU1 509 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 ZNF461Q8TAF7 563 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 SLC7A14Q8TBB6 771 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 POMGNT1Q8WZA1 660 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 ACCSQ96QU6 501 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 PYM1Q9BRP8 204 aaKnown RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 OXCT2Q9BYC2 517 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 TRIM9Q9C026 710 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 ASB7Q9H672 318 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 PANK4Q9NVE7 773 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 IGSF9Q9P2J2 1179 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 RAPGEFL1Q9UHV5 662 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 AGO2Q9UKV8 859 aaKnown RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 MAFFQ9ULX9 164 aa8.31□□□□□ -1.08
SNHG1-223ENST00000545440 ZFP37Q9Y6Q3 630 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-223ENST00000545440 CACNA1HO95180 2353 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 UBE4BO95155 1302 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ARHGEF37A1IGU5 675 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 EIF3DO15371 548 aaKnown RBP eCLIP8.3□□□□□ -1.08
SNHG1-223ENST00000545440 N4BP1O75113 896 aaKnown RBP8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ABLIM3O94929 683 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 OAZ2O95190 189 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 IL18RAPO95256 599 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 MYBP10242 640 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ATF2P15336 505 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 GARTP22102 1010 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ADSSP30520 456 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 GBP2P32456 591 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-223ENST00000545440 PLA2G5P39877 138 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ADH7P40394 386 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ME1P48163 572 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ACOT2P49753 483 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 YWHAHQ04917 246 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-223ENST00000545440 CTXN3Q4LDR2 81 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 RESP18Q5W5W9 173 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 TPGS2Q68CL5 300 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 GET4Q7L5D6 327 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-223ENST00000545440 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
SNHG1-223ENST00000545440 TCEAL8Q8IYN2 117 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 FBXL6Q8N531 539 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 NXPE3Q969Y0 559 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 DHX58Q96C10 678 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 CRELD1Q96HD1 420 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 PANK2Q9BZ23 570 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 TMEM206Q9H813 350 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 TBC1D7Q9P0N9 293 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 FBXL5Q9UKA1 691 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 PCDHA7Q9UN72 937 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 DUSP12Q9UNI6 340 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 MYO16Q9Y6X6 1858 aa8.3□□□□□ -1.08
SNHG1-223ENST00000545440 ELOA3CA0A087WX78 387 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ANO9A1A5B4 782 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 PIRO00625 290 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 PRRG1O14668 218 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 SCAMP3O14828 347 aaKnown RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 KIAA0391O15091 583 aaKnown RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 CCL16O15467 120 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 LRG1P02750 347 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ODC1P11926 461 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 LAMP2P13473 410 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 CPB1P15086 417 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 TYMPP19971 482 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 GUCY2FP51841 1108 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 LILRA4P59901 499 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ASIC1P78348 528 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 TDGQ13569 410 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 C9orf57Q5W0N0 161 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 CRELD2Q6UXH1 353 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 GRASPQ7Z6J2 395 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 BRSK2Q8IWQ3 736 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 EFCAB13Q8IY85 973 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 SYCP3Q8IZU3 236 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 CACTIN-AS1Q8N1I8 211 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 ZNF560Q96MR9 790 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 MYADMQ96S97 322 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 C7orf25Q9BPX7 421 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 FGFBP2Q9BYJ0 223 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 IKZF4Q9H2S9 585 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 SMOC2Q9H3U7 446 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 AFF4Q9UHB7 1163 aaKnown RBP8.29□□□□□ -1.08
SNHG1-223ENST00000545440 CDH7Q9ULB5 785 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 KCNH3Q9ULD8 1083 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 SLC6A14Q9UN76 642 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 INSL5Q9Y5Q6 135 aa8.29□□□□□ -1.08
SNHG1-223ENST00000545440 WDFY4Q6ZS81 3184 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 A0A1W2PP55 124 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 OR6C75A6NL08 312 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 ANHXE9PGG2 379 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 PPEF2O14830 753 aa8.28□□□□□ -1.08
SNHG1-223ENST00000545440 POLR2DO15514 142 aaKnown RBP8.28□□□□□ -1.08
SNHG1-223ENST00000545440 EXTL3O43909 919 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms