RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 YAF2Q8IY57 180 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 DEPDC1BQ8WUY9 529 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 MRPS31Q92665 395 aaKnown RBP16.74■□□□□ 0.27
CCDC78-216ENST00000544996 C8orf48Q96LL4 319 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
CCDC78-216ENST00000544996 PRRX2Q99811 253 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 MED10Q9BTT4 135 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 BCO2Q9BYV7 579 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 NIF3L1Q9GZT8 377 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 BRD9Q9H8M2 597 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 RAB20Q9NX57 234 aa16.74■□□□□ 0.27
CCDC78-216ENST00000544996 KRBA1A5PL33 1030 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 HEPACAM2A8MVW5 462 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 GNA14O95837 355 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 F11P03951 625 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 WEE1P30291 646 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 AVPR1AP37288 418 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 NDST1P52848 882 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 VCPP55072 806 aaKnown RBP16.73■□□□□ 0.27
CCDC78-216ENST00000544996 GRM2Q14416 872 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 SLC44A4Q53GD3 710 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 VITQ6UXI7 678 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 DENND5BQ6ZUT9 1274 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 ACOT1Q86TX2 421 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 MFSD6LQ8IWD5 586 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 TTC39CQ8N584 583 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 STKLD1Q8NE28 680 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 IRF7Q92985 503 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 FAXDC2Q96IV6 333 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 DUSP9Q99956 384 aaKnown RBP16.73■□□□□ 0.27
CCDC78-216ENST00000544996 B3GNT5Q9BYG0 378 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 ZNF518BQ9C0D4 1074 aa16.73■□□□□ 0.27
CCDC78-216ENST00000544996 APOBEC3GQ9HC16 384 aaKnown RBP16.73■□□□□ 0.27
CCDC78-216ENST00000544996 TRIOO75962 3097 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 F8VP50 259 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 ZNF263O14978 683 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
CCDC78-216ENST00000544996 NPR3P17342 541 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 GDI1P31150 447 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 NUBP1P53384 320 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 PRKCQQ04759 706 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 INCA1Q0VD86 236 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 PHLDB3Q6NSJ2 640 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 TMEM150AQ86TG1 271 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 CMTM8Q8IZV2 173 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 CRYBG2Q8N1P7 616 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 MAB21L3Q8N8X9 362 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 SEMA4DQ92854 862 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 DNASE1L2Q92874 299 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 NT5C1AQ9BXI3 368 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 SLC46A2Q9BY10 475 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 CLSTN2Q9H4D0 955 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 TBC1D17Q9HA65 648 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 OBP2AQ9NY56 170 aa16.72■□□□□ 0.27
CCDC78-216ENST00000544996 GOLGA6L22H0YM25 854 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CLDN5O00501 218 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CD58P19256 250 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 AOC1P19801 751 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 STX17P56962 302 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CETN1Q12798 172 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 MLF2Q15773 248 aaPredicted RBP16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CBWD6Q4V339 395 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CBWD3Q5JTY5 395 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CBWD5Q5RIA9 395 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CWF19L1Q69YN2 538 aaKnown RBP16.71■□□□□ 0.27
CCDC78-216ENST00000544996 MON1AQ86VX9 555 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 GPIHBP1Q8IV16 184 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 CELF5Q8N6W0 485 aaKnown RBP16.71■□□□□ 0.27
CCDC78-216ENST00000544996 SMARCD1Q96GM5 515 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 NUP62CLQ9H1M0 184 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 COQ4Q9Y3A0 265 aa16.71■□□□□ 0.27
CCDC78-216ENST00000544996 PPP3CCP48454 512 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 PDE6CP51160 858 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 STARD6P59095 220 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 FCHO2Q0JRZ9 810 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 ORC1Q13415 861 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 FAM35AQ86V20 835 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 FUKQ8N0W3 1084 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 TMEM105Q8N8V8 129 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 MLKLQ8NB16 471 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
CCDC78-216ENST00000544996 FAM124BQ9H5Z6 455 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-216ENST00000544996 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 DMAP1Q9NPF5 467 aaPredicted RBP16.7■□□□□ 0.26
CCDC78-216ENST00000544996 TRPV5Q9NQA5 729 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 KRT82Q9NSB4 513 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 LMBRD1Q9NUN5 540 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 THG1LQ9NWX6 298 aaKnown RBP16.7■□□□□ 0.26
CCDC78-216ENST00000544996 TRPM5Q9NZQ8 1165 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 HMGXB4Q9UGU5 601 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 RWDD2AQ9UIY3 292 aa16.7■□□□□ 0.26
CCDC78-216ENST00000544996 TRAV19A0A0A6YYK7 116 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 CHADO15335 359 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 LRRN2O75325 713 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 CILPO75339 1184 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 AP1G2O75843 785 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 RTN3O95197 1032 aaPredicted RBP16.69■□□□□ 0.26
CCDC78-216ENST00000544996 PRAMEF12O95522 483 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms