RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 FAM49BQ9NUQ9 324 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 DUSP12Q9UNI6 340 aa23.17■■□□□ 1.3
OTUB1-212ENST00000543988 ATP8B3O60423 1300 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 TRIM66O15016 1216 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 P4HA2O15460 535 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 CDC25CP30307 473 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 SIGLEC14Q08ET2 396 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 CUL2Q13617 745 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 TPD52L1Q16890 204 aaPredicted RBP23.16■■□□□ 1.3
OTUB1-212ENST00000543988 TMEM31Q5JXX7 168 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 C12orf29Q8N999 325 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 ZSCAN18Q8TBC5 510 aaPredicted RBP23.16■■□□□ 1.3
OTUB1-212ENST00000543988 SLC2A14Q8TDB8 520 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 SMARCD2Q92925 531 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 TRMT2BQ96GJ1 504 aaKnown RBP23.16■■□□□ 1.3
OTUB1-212ENST00000543988 C8orf48Q96LL4 319 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 THAP9Q9H5L6 903 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 TECTAO75443 2155 aa23.16■■□□□ 1.3
OTUB1-212ENST00000543988 TMEM221A6NGB7 291 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 M0R296 226 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 GPR37L1O60883 481 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 TADA3O75528 432 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 ANXA13P27216 316 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 GPR158Q5T848 1215 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 TANGO2Q6ICL3 276 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 LMO3Q8TAP4 145 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 ASIC4Q96FT7 647 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 SMARCD1Q96GM5 515 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 MYRFLQ96LU7 910 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 TMEM63CQ9P1W3 806 aa23.15■■□□□ 1.3
OTUB1-212ENST00000543988 ECI2O75521 394 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 F11P03951 625 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 USP46P62068 366 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 CETN1Q12798 172 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 ZNF394Q53GI3 561 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 ARHGAP15Q53QZ3 475 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 CT47A1Q5JQC4 288 aaPredicted RBP23.14■■□□□ 1.29
OTUB1-212ENST00000543988 CREBRFQ8IUR6 639 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 TTC39CQ8N584 583 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 CEP295NLQ96MC4 621 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 NT5C1BQ96P26 610 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 PLA2G2FQ9BZM2 168 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 GPR88Q9GZN0 384 aa23.14■■□□□ 1.29
OTUB1-212ENST00000543988 UXTQ9UBK9 157 aaPredicted RBP23.14■■□□□ 1.29
OTUB1-212ENST00000543988 NCANO14594 1321 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 AP1G2O75843 785 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 SRFP11831 508 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 VIPR2P41587 438 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 HSP90AA4PQ58FG1 418 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 SASS6Q6UVJ0 657 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 DENND5BQ6ZUT9 1274 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 UBR7Q8N806 425 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 ELSPBP1Q96BH3 223 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 LRFN3Q9BTN0 628 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 INTS2Q9H0H0 1204 aaKnown RBP23.13■■□□□ 1.29
OTUB1-212ENST00000543988 FAM124BQ9H5Z6 455 aaPredicted RBP23.13■■□□□ 1.29
OTUB1-212ENST00000543988 TASP1Q9H6P5 420 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 TRPV4Q9HBA0 871 aa23.13■■□□□ 1.29
OTUB1-212ENST00000543988 DMAP1Q9NPF5 467 aaPredicted RBP23.13■■□□□ 1.29
OTUB1-212ENST00000543988 TRIM21P19474 475 aaKnown RBP23.12■■□□□ 1.29
OTUB1-212ENST00000543988 TBXAS1P24557 533 aaPredicted RBP23.12■■□□□ 1.29
OTUB1-212ENST00000543988 ADORA2BP29275 332 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 MTIF2P46199 727 aaKnown RBP23.12■■□□□ 1.29
OTUB1-212ENST00000543988 RAD23BP54727 409 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 STX1AQ16623 288 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 C11orf57Q6ZUT1 292 aaPredicted RBP23.12■■□□□ 1.29
OTUB1-212ENST00000543988 HFE2Q6ZVN8 426 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 SLC4A11Q8NBS3 891 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 KAT5Q92993 513 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 RSPRY1Q96DX4 576 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 KCNK16Q96T55 309 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 HNRNPABQ99729 332 aaKnown RBP23.12■■□□□ 1.29
OTUB1-212ENST00000543988 TTLL2Q9BWV7 592 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 ZFP14Q9HCL3 533 aa23.12■■□□□ 1.29
OTUB1-212ENST00000543988 PRR33A8MZF0 331 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 PRAMEF12O95522 483 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 CFHP08603 1231 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 CAVIN1Q6NZI2 390 aaKnown RBP23.11■■□□□ 1.29
OTUB1-212ENST00000543988 GPIHBP1Q8IV16 184 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 ARHGEF19Q8IW93 802 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 FAM114A1Q8IWE2 563 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 PPM1KQ8N3J5 372 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 EHBP1Q8NDI1 1231 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 ZMIZ2Q8NF64 920 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 MRPS31Q92665 395 aaKnown RBP23.11■■□□□ 1.29
OTUB1-212ENST00000543988 SMOQ99835 787 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 SLC46A2Q9BY10 475 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 ANO10Q9NW15 660 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 GCNT4Q9P109 453 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 PTPRDP23468 1912 aa23.11■■□□□ 1.29
OTUB1-212ENST00000543988 BEST1O76090 585 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 FAM200BP0CF97 657 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 YWHAEP62258 255 aaKnown RBP23.1■■□□□ 1.29
OTUB1-212ENST00000543988 GPC5P78333 572 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 TXNDC8Q6A555 127 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 ARID3BQ8IVW6 561 aaPredicted RBP23.1■■□□□ 1.29
OTUB1-212ENST00000543988 CYFIP2Q96F07 1278 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 TMEM176AQ96HP8 235 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 HEXIM2Q96MH2 286 aaKnown RBP23.1■■□□□ 1.29
OTUB1-212ENST00000543988 DNAI2Q9GZS0 605 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms