RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 MFSD6LQ8IWD5 586 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 CCDC105Q8IYK2 499 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 E2F7Q96AV8 911 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 PHOX2BQ99453 314 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 TASP1Q9H6P5 420 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 TRPV4Q9HBA0 871 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 ABCB6Q9NP58 842 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 CRTAC1Q9NQ79 661 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.18■□□□□ 0.02
LTBR-209ENST00000541102 HEBP1Q9NRV9 189 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 ARMCX3Q9UH62 379 aaPredicted RBP15.18■□□□□ 0.02
LTBR-209ENST00000541102 DACH1Q9UI36 760 aa15.18■□□□□ 0.02
LTBR-209ENST00000541102 KANSL1LA0AUZ9 987 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 SLC38A8A6NNN8 435 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 ZNF263O14978 683 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 TACC1O75410 805 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 CSH1P0DML2 217 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 CSH2P0DML3 217 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 KRT13P13646 458 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 BDNFP23560 247 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 NCOA4Q13772 614 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 ZNF699Q32M78 642 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 ZACNQ401N2 412 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 CCDC40Q4G0X9 1142 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 CBWD6Q4V339 395 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 DCAF17Q5H9S7 520 aaPredicted RBP15.17■□□□□ 0.02
LTBR-209ENST00000541102 ZNF667Q5HYK9 610 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 MDH1BQ5I0G3 518 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 CBWD3Q5JTY5 395 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 CBWD5Q5RIA9 395 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 TPRG1Q6ZUI0 275 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 FRMD5Q7Z6J6 570 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 ENOX1Q8TC92 643 aaKnown RBP15.17■□□□□ 0.02
LTBR-209ENST00000541102 DEPDC1BQ8WUY9 529 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 IRF7Q92985 503 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 MYLPFQ96A32 169 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 CNOT6LQ96LI5 555 aaKnown RBP15.17■□□□□ 0.02
LTBR-209ENST00000541102 SLC46A2Q9BY10 475 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 SMG9Q9H0W8 520 aaKnown RBP15.17■□□□□ 0.02
LTBR-209ENST00000541102 XYLT2Q9H1B5 865 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 IRF2BPLQ9H1B7 796 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 MTF2Q9Y483 593 aaPredicted RBP15.17■□□□□ 0.02
LTBR-209ENST00000541102 NFE2L3Q9Y4A8 694 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 NME7Q9Y5B8 376 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 PIEZO1Q92508 2521 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 NCANO14594 1321 aa15.17■□□□□ 0.02
LTBR-209ENST00000541102 FAM170BA6NMN3 283 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 A8MXQ7 604 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 IKBKBO14920 756 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 LETM1O95202 739 aaPredicted RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 STAU1O95793 577 aaKnown RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 F11P03951 625 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 FAM163BP0C2L3 166 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 CCDC192P0DO97 292 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 PTPN1P18031 435 aaKnown RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 GRIK1P39086 918 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 RAP1GAPP47736 663 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 CDH8P55286 799 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 MARSP56192 900 aaKnown RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 MAPRE1Q15691 268 aaKnown RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 CFAP221Q4G0U5 840 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 CT47A1Q5JQC4 288 aaPredicted RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 TCERG1LQ5VWI1 586 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 SCARA5Q6ZMJ2 495 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 TMEM150AQ86TG1 271 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 DHX40Q8IX18 779 aaKnown RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 AOPEPQ8N6M6 819 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 PJA1Q8NG27 643 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 MYCBPAPQ8TBZ2 947 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 TAS1R2Q8TE23 839 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 DNASE1L2Q92874 299 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 FUBP3Q96I24 572 aaKnown RBP eCLIP15.16■□□□□ 0.02
LTBR-209ENST00000541102 DDX23Q9BUQ8 820 aaKnown RBP15.16■□□□□ 0.02
LTBR-209ENST00000541102 DPEP3Q9H4B8 488 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 SMYD3Q9H7B4 428 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 FANCLQ9NW38 375 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 COL4A3Q01955 1670 aa15.16■□□□□ 0.02
LTBR-209ENST00000541102 HLA-DRAP01903 254 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
LTBR-209ENST00000541102 MAGEA11P43364 429 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 MRE11P49959 708 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 ANGPT1Q15389 498 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
LTBR-209ENST00000541102 SGSM1Q2NKQ1 1148 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 CDKAL1Q5VV42 579 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 TXNDC8Q6A555 127 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 SPOPLQ6IQ16 392 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 ZNF852Q6ZMS4 543 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 CREBRFQ8IUR6 639 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 MAB21L3Q8N8X9 362 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 TTC8Q8TAM2 541 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 MRPS31Q92665 395 aaKnown RBP15.15■□□□□ 0.02
LTBR-209ENST00000541102 PCED1BQ96HM7 432 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 LRRC3BQ96PB8 259 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 LTB4R2Q9NPC1 389 aa15.15■□□□□ 0.02
LTBR-209ENST00000541102 F5P12259 2224 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms