RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 LCA5Q86VQ0 697 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 COL23A1Q86Y22 540 aaPredicted RBP6.72□□□□□ -1.33
MRE11-209ENST00000540013 BRSK2Q8IWQ3 736 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 TEX11Q8IYF3 940 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 OR5AN1Q8NGI8 311 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 RFFLQ8WZ73 363 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 HERVK_113Q902F9 699 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 LPPQ93052 612 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 RADILQ96JH8 1075 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 MYL10Q9BUA6 226 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 CNPPD1Q9BV87 410 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 MSL2Q9HCI7 577 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 NRKQ7Z2Y5 1582 aa6.72□□□□□ -1.33
MRE11-209ENST00000540013 KIAA0232Q92628 1395 aa6.71□□□□□ -1.33
MRE11-209ENST00000540013 USP6P35125 1406 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 A0A1W2PPC4 97 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 CHL1O00533 1208 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 NPC1O15118 1278 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 SLC3A2P08195 630 aaKnown RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 HNRNPLP14866 589 aaKnown RBP eCLIP6.71□□□□□ -1.34
MRE11-209ENST00000540013 MUTP22033 750 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 EEF1GP26641 437 aaKnown RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 COPAP53621 1224 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 EFR3AQ14156 821 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 NOLC1Q14978 699 aaKnown RBP eCLIP6.71□□□□□ -1.34
MRE11-209ENST00000540013 ZNF827Q17R98 1081 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.71□□□□□ -1.34
MRE11-209ENST00000540013 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 TTC31Q49AM3 519 aaPredicted RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 DNAJC21Q5F1R6 531 aaKnown RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 UBXN11Q5T124 520 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 ZNF449Q6P9G9 518 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 ARHGEF18Q6ZSZ5 1173 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 TTLL10Q6ZVT0 673 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 UBE2Q1Q7Z7E8 422 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 PPM1NQ8N819 430 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 CCDC191Q8NCU4 936 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 ADAMTS15Q8TE58 950 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 IPCEF1Q8WWN9 437 aaPredicted RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 RIN2Q8WYP3 895 aaPredicted RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 HTRA1Q92743 480 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 GFM2Q969S9 779 aaKnown RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 HIC2Q96JB3 615 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 MAELQ96JY0 434 aaKnown RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 HIST1H2AHQ96KK5 128 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 HIST1H2AJQ99878 128 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 ADPGKQ9BRR6 497 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 PITHD1Q9GZP4 211 aaPredicted RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 KIAA1683Q9H0B3 1180 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 OBP2BQ9NPH6 170 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 CEP72Q9P209 647 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 DENND2AQ9ULE3 1009 aa6.71□□□□□ -1.34
MRE11-209ENST00000540013 NAP1L2Q9ULW6 460 aaPredicted RBP6.71□□□□□ -1.34
MRE11-209ENST00000540013 LGALS16A8MUM7 142 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 H7C0S8 307 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 IPO5O00410 1097 aaKnown RBP6.7□□□□□ -1.34
MRE11-209ENST00000540013 B4GALT3O60512 393 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 MTHFD1P11586 935 aaKnown RBP6.7□□□□□ -1.34
MRE11-209ENST00000540013 ALOX12P18054 663 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 GPR15P49685 360 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 BPIFB3P59826 476 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 RAB1AP62820 205 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 TRPC3Q13507 836 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 MAN2A1Q16706 1144 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 UGT8Q16880 541 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 CCDC178Q5BJE1 867 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 CCDC158Q5M9N0 1113 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 TRIM68Q6AZZ1 485 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 SLC30A6Q6NXT4 461 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 KLHDC10Q6PID8 442 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 CXorf67Q86X51 503 aaPredicted RBP6.7□□□□□ -1.34
MRE11-209ENST00000540013 VSIG1Q86XK7 387 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 GALNT13Q8IUC8 556 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 CPOQ8IVL8 374 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 ZDHHC14Q8IZN3 488 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 TEX9Q8N6V9 391 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 SPPL3Q8TCT6 385 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 ANKS1AQ92625 1134 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 ZNF566Q969W8 418 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 SPAG5Q96R06 1193 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 KATNAL1Q9BW62 490 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 MTG2Q9H4K7 406 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 ZNF287Q9HBT7 754 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 POLR3BQ9NW08 1133 aaPredicted RBP6.7□□□□□ -1.34
MRE11-209ENST00000540013 STAP2Q9UGK3 403 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 ITGB1BP2Q9UKP3 347 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 PIK3C2AO00443 1686 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 SPATA31A5Q5VU36 1347 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 SPATA31A7Q8IWB4 1347 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 MON2Q7Z3U7 1717 aa6.7□□□□□ -1.34
MRE11-209ENST00000540013 CPDO75976 1380 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 LMO7Q8WWI1 1683 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 THSD7AQ9UPZ6 1657 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 A0A0A6YYJ9 748 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 CCDC196A0A1B0GTZ2 297 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 CCDC154A6NI56 674 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 PHGDHO43175 533 aaKnown RBP6.69□□□□□ -1.34
MRE11-209ENST00000540013 DAPK3O43293 454 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms