RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 IRAK1BP1Q5VVH5 260 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 EGFLAMQ63HQ2 1017 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ANKRD40Q6AI12 368 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 METTL2BQ6P1Q9 378 aaKnown RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 SYCE2Q6PIF2 218 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 GADL1Q6ZQY3 521 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 C15orf52Q6ZUT6 534 aaKnown RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 CYP4V2Q6ZWL3 525 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 KRT26Q7Z3Y9 468 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 GALNT7Q86SF2 657 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 CHSY1Q86X52 802 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 LACC1Q8IV20 430 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 TPH2Q8IWU9 490 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ULK2Q8IYT8 1036 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 RTKN2Q8IZC4 609 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 SLAIN1Q8ND83 568 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 TBC1D15Q8TC07 691 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 PNPT1Q8TCS8 783 aaKnown RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 EPS8L3Q8TE67 593 aaKnown RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 EPS8L1Q8TE68 723 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 PPP4R1Q8TF05 950 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 S100ZQ8WXG8 99 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 EAF2Q96CJ1 260 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 THAP11Q96EK4 314 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ZNF486Q96H40 463 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 SLC39A13Q96H72 371 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 SCYL1Q96KG9 808 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 TRIM47Q96LD4 638 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 NACC1Q96RE7 527 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 TWNKQ96RR1 684 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ZNF347Q96SE7 839 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ZC3H12CQ9C0D7 883 aaKnown RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 HOXD1Q9GZZ0 328 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 CSRNP2Q9H175 543 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 VPS11Q9H270 941 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 SNX25Q9H3E2 840 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 CNNM2Q9H8M5 875 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 C12orf4Q9NQ89 552 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 OLFML3Q9NRN5 406 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 GPRC5DQ9NZD1 345 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ARMCX3Q9UH62 379 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ASIC3Q9UHC3 531 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 AMACRQ9UHK6 382 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ANGEL1Q9UNK9 670 aaKnown RBP6.4□□□□□ -1.38
SNHG1-211ENST00000539921 DTNAQ9Y4J8 743 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 CPQQ9Y646 472 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 SLC12A7Q9Y666 1083 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 TACC3Q9Y6A5 838 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 CSNK1G3Q9Y6M4 447 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 PSME4Q14997 1843 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 ATAD5Q96QE3 1844 aa6.4□□□□□ -1.38
SNHG1-211ENST00000539921 NCANO14594 1321 aa6.4□□□□□ -1.39
SNHG1-211ENST00000539921 MYH10P35580 1976 aa6.4□□□□□ -1.39
SNHG1-211ENST00000539921 ADAMTS13Q76LX8 1427 aa6.4□□□□□ -1.39
SNHG1-211ENST00000539921 C3P01024 1663 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 LMO7Q8WWI1 1683 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 KIF13BQ9NQT8 1826 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 A0A087WXM4 84 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 KDM4FA0A1W2PPD8 638 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 TLDC2A0PJX2 215 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 LRRIQ4A6NIV6 560 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 FAM155AB1AL88 458 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 H3BRJ5 948 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 IRS4O14654 1257 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 TM9SF1O15321 606 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 PDPK1O15530 556 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 MSI1O43347 362 aaKnown RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 FOXD2O60548 495 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 IDH1O75874 414 aaKnown RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 TTC4O95801 387 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 HMOX1P09601 288 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 NUDT7P0C024 238 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 SRGAP2BP0DMP2 458 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 RBP3P10745 1247 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 KRT3P12035 628 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 MYL4P12829 197 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 BMP1P13497 986 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 SCG2P13521 617 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 NCAM1P13591 858 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 ITIH1P19827 911 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 BTF3P20290 206 aaKnown RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 IL10P22301 178 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 ITGA6P23229 1130 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 KLRC1P26715 233 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 PMLP29590 882 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 NMT1P30419 496 aaKnown RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 RRM2P31350 389 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 FOXN2P32314 431 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 TRIM23P36406 574 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 ETFBP38117 255 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 PRKCIP41743 596 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 METAP2P50579 478 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 AQP4P55087 323 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 ADAM17P78536 824 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 ATP2C1P98194 919 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 IFITM2Q01629 132 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 DLG1Q12959 904 aa6.39□□□□□ -1.39
SNHG1-211ENST00000539921 IFIT5Q13325 482 aaKnown RBP6.39□□□□□ -1.39
SNHG1-211ENST00000539921 KRR1Q13601 381 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms