RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 A0A0U1RQJ8 604 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 MYBPHLA2RUH7 354 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 KIF5CO60282 957 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 TBC1D4O60343 1298 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 ATP2C2O75185 946 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 CYP1A2P05177 515 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 FAM200BP0CF97 657 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 NPR3P17342 541 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 ABCB4P21439 1286 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 ADORA2BP29275 332 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
LEMD3-202ENST00000539442 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
LEMD3-202ENST00000539442 KRT17Q04695 432 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 PTP4A2Q12974 167 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 PDCLQ13371 301 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 PTPN14Q15678 1187 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 NFE2Q16621 373 aaPredicted RBP11.26□□□□□ -0.61
LEMD3-202ENST00000539442 IFI16Q16666 785 aaKnown RBP11.26□□□□□ -0.61
LEMD3-202ENST00000539442 PTPN20Q4JDL3 420 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 CTXN3Q4LDR2 81 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 RTP2Q5QGT7 225 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 NYAP1Q6ZVC0 841 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 ERICH1Q86X53 443 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 WDTC1Q8N5D0 677 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 IPO4Q8TEX9 1081 aaKnown RBP11.26□□□□□ -0.61
LEMD3-202ENST00000539442 SLC35F5Q8WV83 523 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 ATRIPQ8WXE1 791 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 SECISBP2LQ93073 1101 aaKnown RBP11.26□□□□□ -0.61
LEMD3-202ENST00000539442 MYLPFQ96A32 169 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 ZNF653Q96CK0 615 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 SMARCD1Q96GM5 515 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 PCED1BQ96HM7 432 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 FUBP3Q96I24 572 aaKnown RBP eCLIP11.26□□□□□ -0.616e-7■□□□□ 11.2
LEMD3-202ENST00000539442 C11orf70Q9BRQ4 267 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 MED10Q9BTT4 135 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 DUSP16Q9BY84 665 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 ADAM22Q9P0K1 906 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 UVRAGQ9P2Y5 699 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 MTRRQ9UBK8 725 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 GUCA1BQ9UMX6 200 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
LEMD3-202ENST00000539442 XPO1O14980 1071 aaKnown RBP11.25□□□□□ -0.61
LEMD3-202ENST00000539442 MTA2O94776 668 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 ACADSBP45954 432 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 PLA2G4AP47712 749 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 GABRB2P47870 512 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 RPL34P49207 117 aaKnown RBP11.25□□□□□ -0.61
LEMD3-202ENST00000539442 GLUD2P49448 558 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 DSG1Q02413 1049 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 CREMQ03060 361 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 PDE4CQ08493 712 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 SHHQ15465 462 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 CFAP221Q4G0U5 840 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 KIAA1841Q6NSI8 718 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 Q6ZNB5 142 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 MMS22LQ6ZRQ5 1243 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 PAQR9Q6ZVX9 377 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 SPATA2LQ8IUW3 424 aaPredicted RBP11.25□□□□□ -0.61
LEMD3-202ENST00000539442 UBA3Q8TBC4 463 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 C2orf15Q8WU43 125 aaKnown RBP11.25□□□□□ -0.61
LEMD3-202ENST00000539442 HSFY1Q96LI6 401 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 ALS2CR12Q96Q35 445 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 TMEM209Q96SK2 561 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 GDF15Q99988 308 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 LPIN3Q9BQK8 851 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 PLVAPQ9BX97 442 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 VN1R3Q9BXE9 311 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 UBXN6Q9BZV1 441 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 MRPL47Q9HD33 250 aaKnown RBP11.25□□□□□ -0.61
LEMD3-202ENST00000539442 ABCB6Q9NP58 842 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 TRIM10Q9UDY6 481 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 CNOT8Q9UFF9 292 aaKnown RBP11.25□□□□□ -0.61
LEMD3-202ENST00000539442 CYTH4Q9UIA0 394 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 TFR2Q9UP52 801 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 LZTS1Q9Y250 596 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
LEMD3-202ENST00000539442 MACROD2A1Z1Q3 448 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 LINC01553A4QN01 128 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 AP1G2O75843 785 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 FGF18O76093 207 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 ABL1P00519 1130 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 URODP06132 367 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 RRM1P23921 792 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 BMPR1AP36894 532 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 TAP1Q03518 808 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 GPR17Q13304 367 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 ZNF268Q14587 947 aaPredicted RBP11.24□□□□□ -0.61
LEMD3-202ENST00000539442 PSMD5Q16401 504 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 CCDC142Q17RM4 750 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 SLC39A12Q504Y0 691 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 PLEKHA7Q6IQ23 1121 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 SLC8B1Q6J4K2 584 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 CLEC20AQ6ZU45 233 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 TAS1R1Q7RTX1 841 aa11.24□□□□□ -0.61
LEMD3-202ENST00000539442 TMEM110Q86TL2 294 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms