RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ZBTB45Q96K62 511 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 SPATA16Q9BXB7 569 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 STN1Q9H668 368 aaKnown RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 FOXN3O00409 490 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 MEFVO15553 781 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 AXLP30530 894 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 NDST1P52848 882 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 RHBDL3P58872 404 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 RHOAP61586 193 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 EMBQ6PCB8 327 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 RD3Q7Z3Z2 195 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 SLC47A2Q86VL8 602 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 ARL8AQ96BM9 186 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 OSBPL8Q9BZF1 889 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 TRIM33Q9UPN9 1127 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 GAKO14976 1311 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 BTBD19C9JJ37 291 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 SPECC1L-ADORA2AF8WAN1 911 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 E2F6O75461 281 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 SCNN1GP51170 649 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 FKBP1BP68106 108 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 AMPD2Q01433 879 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 BST2Q10589 180 aaKnown RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 FNDC3BQ53EP0 1204 aaKnown RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 ILDR1Q86SU0 546 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 WDR48Q8TAF3 677 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 TAS1R2Q8TE23 839 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 GAD1Q99259 594 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 TFR2Q9UP52 801 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 SMIM22K7EJ46 135 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 INPP1P49441 399 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 GABPB1Q06547 395 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 ADIGQ0VDE8 80 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 MTHFD1LQ6UB35 978 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 FIBCD1Q8N539 461 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 TSPAN17Q96FV3 270 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 ZNF558Q96NG5 402 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 KDM4CQ9H3R0 1056 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 SEMA6BQ9H3T3 888 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 TASP1Q9H6P5 420 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 NMRK2Q9NPI5 230 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 FGFR1OP2Q9NVK5 253 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 PCDHGB4Q9UN71 923 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 NRCAMQ92823 1304 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 EML1O00423 815 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 STX7O15400 261 aaKnown RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 CD44P16070 742 aaKnown RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 GUCY2CP25092 1073 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 RARRES1P49788 294 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 CES5AQ6NT32 575 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 NECAB2Q7Z6G3 386 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 TFAP2DQ7Z6R9 452 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 FAM131BQ86XD5 332 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 CCDC60Q8IWA6 550 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 KRT35Q92764 455 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 KAT2BQ92831 832 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 TATDN2Q93075 761 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 FAM163AQ96GL9 167 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 PPP1R2P1Q96PQ5 205 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 UPF3AQ9H1J1 476 aaKnown RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 PAK5Q9P286 719 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 NEU2Q9Y3R4 380 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 C2orf81A6NN90 581 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 MICAL2O94851 1124 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 BDNFP23560 247 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 STARD3Q14849 445 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 MORF4L2Q15014 288 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 TRIM65Q6PJ69 517 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.58□□□□□ -1.52
LRP6-203ENST00000538239 SPATS2Q86XZ4 545 aaKnown RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 EPC1Q9H2F5 836 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 OSGEPL1Q9H4B0 414 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 TXLNGQ9NUQ3 528 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 PCMTD2Q9NV79 361 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 KIF17Q9P2E2 1029 aa5.58□□□□□ -1.52
LRP6-203ENST00000538239 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.58□□□□□ -1.52
LRP6-203ENST00000538239 HEATR9A2RTY3 570 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 RECQL4O94761 1208 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 FBXO21O94952 628 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 BRAFP15056 766 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 EPB42P16452 691 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 GGCXP38435 758 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 PTGER2P43116 358 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 WASHC5Q12768 1159 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 PLCL1Q15111 1095 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 EARS2Q5JPH6 523 aaKnown RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 TPGS1Q6ZTW0 290 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 NIPA1Q7RTP0 329 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 KLRG1Q96E93 195 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 MAGEB10Q96LZ2 347 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 SLC39A10Q9ULF5 831 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 MROH7Q68CQ1 1323 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 RIC1Q4ADV7 1423 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 YDJCA8MPS7 323 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 TBC1D12O60347 775 aa5.57□□□□□ -1.52
LRP6-203ENST00000538239 USP2O75604 605 aaPredicted RBP5.57□□□□□ -1.52
LRP6-203ENST00000538239 TMEM253P0C7T8 217 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms