RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 FAM171BQ6P995 826 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 SHC4Q6S5L8 630 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 VSTM1Q6UX27 236 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 EPM2AIP1Q7L775 607 aaPredicted RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 HS2ST1Q7LGA3 356 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 NELFCDQ8IXH7 590 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 RDH13Q8NBN7 331 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 RIN3Q8TB24 985 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 ZNF507Q8TCN5 953 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 KBTBD7Q8WVZ9 684 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 FOXD4L4Q8WXT5 416 aaPredicted RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 ATP2A3Q93084 1043 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 MYLPFQ96A32 169 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 CGRRF1Q99675 332 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 C7orf25Q9BPX7 421 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 PARD6AQ9NPB6 346 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 AGPAT3Q9NRZ7 376 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 C2orf42Q9NWW7 574 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 DUS2Q9NX74 493 aaKnown RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
CHD4-207ENST00000537634 PTPRDP23468 1912 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 GREB1Q4ZG55 1949 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 ANAPC1Q9H1A4 1944 aa10.36□□□□□ -0.75
CHD4-207ENST00000537634 RALGAPA1Q6GYQ0 2036 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 POLR2DO15514 142 aaKnown RBP10.35□□□□□ -0.75
CHD4-207ENST00000537634 PDGFRBP09619 1106 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 PDIA4P13667 645 aaKnown RBP10.35□□□□□ -0.75
CHD4-207ENST00000537634 TGM1P22735 817 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 WARSP23381 471 aaKnown RBP10.35□□□□□ -0.75
CHD4-207ENST00000537634 BDNFP23560 247 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 LMO2P25791 158 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 GRIK1P39086 918 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 ME1P48163 572 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 IFNAR2P48551 515 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 PDE6CP51160 858 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 SNRPFP62306 86 aaKnown RBP10.35□□□□□ -0.75
CHD4-207ENST00000537634 TNNC1P63316 161 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 CYP24A1Q07973 514 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 USP4Q13107 963 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 PSMD6Q15008 389 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 ZNF77Q15935 545 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 FOXD4L6Q3SYB3 417 aaPredicted RBP10.35□□□□□ -0.75
CHD4-207ENST00000537634 PKN3Q6P5Z2 889 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 FOXD4L3Q6VB84 417 aaPredicted RBP10.35□□□□□ -0.75
CHD4-207ENST00000537634 UNC13DQ70J99 1090 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 TRAPPC11Q7Z392 1133 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 LIMS2Q7Z4I7 341 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 WDR5BQ86VZ2 330 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 HSCBQ8IWL3 235 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 ARL14EPQ8N8R7 260 aaPredicted RBP10.35□□□□□ -0.75
CHD4-207ENST00000537634 XXYLT1Q8NBI6 393 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 OSCP1Q8WVF1 389 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 CCDC127Q96BQ5 260 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 CEP295NLQ96MC4 621 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 SLC22A12Q96S37 553 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 CYP2S1Q96SQ9 504 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 SNX25Q9H3E2 840 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 CRTAC1Q9NQ79 661 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 FAM13BQ9NYF5 915 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 EHD2Q9NZN4 543 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 SLC8A2Q9UPR5 921 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 WNT6Q9Y6F9 365 aa10.35□□□□□ -0.75
CHD4-207ENST00000537634 DCHS1Q96JQ0 3298 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.34□□□□□ -0.75
CHD4-207ENST00000537634 C2orf78A6NCI8 922 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 TRIM66O15016 1216 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 CLIC2O15247 247 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 TGFB1I1O43294 461 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 RNF40O75150 1001 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 CLSTN1O94985 981 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 EGFP01133 1207 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 ZSCAN22P10073 491 aaPredicted RBP10.34□□□□□ -0.75
CHD4-207ENST00000537634 HDCP19113 662 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 DRD1P21728 446 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 GJA4P35212 333 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 ATXN1P54253 815 aaKnown RBP10.34□□□□□ -0.75
CHD4-207ENST00000537634 NR1H3Q13133 447 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 TRPC3Q13507 836 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 WDR72Q3MJ13 1102 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 FBXO43Q4G163 708 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 MDH1BQ5I0G3 518 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 DENND5BQ6ZUT9 1274 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 FAM160A2Q8N612 972 aaPredicted RBP10.34□□□□□ -0.75
CHD4-207ENST00000537634 OR6B3Q8NGW1 331 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 MYCBPAPQ8TBZ2 947 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 SH3RF2Q8TEC5 729 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 SCFD1Q8WVM8 642 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 SNX21Q969T3 373 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 CHFRQ96EP1 664 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 PCED1BQ96HM7 432 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 MRPL45Q9BRJ2 306 aaKnown RBP10.34□□□□□ -0.75
CHD4-207ENST00000537634 RTKNQ9BST9 563 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 BLZF1Q9H2G9 400 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 ECT2Q9H8V3 914 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 SEMA4GQ9NTN9 838 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 TRPM5Q9NZQ8 1165 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 GCNT4Q9P109 453 aa10.34□□□□□ -0.75
CHD4-207ENST00000537634 CGNQ9P2M7 1197 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms