RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TRPC3Q13507 836 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 ARHGAP29Q52LW3 1261 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CAVIN1Q6NZI2 390 aaKnown RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 FAM171BQ6P995 826 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 TSSK4Q6SA08 328 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 C4orf50Q6ZRC1 276 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 DPH6Q7L8W6 267 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 TMEM150AQ86TG1 271 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 C12orf56Q8IXR9 622 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CMTM8Q8IZV2 173 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CELF5Q8N6W0 485 aaKnown RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 GOLGA5Q8TBA6 731 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 MRPS31Q92665 395 aaKnown RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 MYLPFQ96A32 169 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 MSANTD3Q96H12 275 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 HINFPQ9BQA5 517 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 MRPL45Q9BRJ2 306 aaKnown RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 SLC46A2Q9BY10 475 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 CHRDQ9H2X0 955 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 SNX25Q9H3E2 840 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 SEMA4AQ9H3S1 761 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 TSPY26PQ9H489 355 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 C8orf33Q9H7E9 229 aaPredicted RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 LMAN1LQ9HAT1 526 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 FAM53CQ9NYF3 392 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 GTSE1Q9NYZ3 720 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 MAGEC2Q9UBF1 373 aaPredicted RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 UXTQ9UBK9 157 aaPredicted RBP9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 USP25Q9UHP3 1055 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 FBXO4Q9UKT5 387 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 ZDHHC9Q9Y397 364 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 GREB1Q4ZG55 1949 aa9.13□□□□□ -0.95
SFSWAP-202ENST00000535202 ANAPC1Q9H1A4 1944 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 SPECC1L-ADORA2AF8WAN1 911 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 KINO60870 393 aaKnown RBP9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 TADA3O75528 432 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 BDNFP23560 247 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 DDX6P26196 483 aaKnown RBP eCLIP9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 ANXA13P27216 316 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 WEE1P30291 646 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 CTHP32929 405 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 GRIK1P39086 918 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 SYKP43405 635 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 TNK2Q07912 1038 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 PSMD2Q13200 908 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 BIRC3Q13489 604 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 TERF2Q15554 542 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 ZNF528Q3MIS6 628 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 WDR72Q3MJ13 1102 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 CFAP221Q4G0U5 840 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 MDH1BQ5I0G3 518 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 TXNDC8Q6A555 127 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 LIMS2Q7Z4I7 341 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 TTC16Q8NEE8 873 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 OR6B3Q8NGW1 331 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 ZNF516Q92618 1163 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 FUBP3Q96I24 572 aaKnown RBP eCLIP9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 TRPC7Q9HCX4 862 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 CRTAC1Q9NQ79 661 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 PRMT8Q9NR22 394 aaPredicted RBP9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 THG1LQ9NWX6 298 aaKnown RBP9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 ZMYM5Q9UJ78 669 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 HPSEQ9Y251 543 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 CCL26Q9Y258 94 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 NME7Q9Y5B8 376 aa9.12□□□□□ -0.95
SFSWAP-202ENST00000535202 LRRIQ3A6PVS8 624 aaPredicted RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 TACC1O75410 805 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 NR3C1P04150 777 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 RPN1P04843 607 aaKnown RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 CKMP06732 381 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 CHRNB1P11230 501 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 ATICP31939 592 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 GNL1P36915 607 aaPredicted RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 MAGEA11P43364 429 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 NDUFA8P51970 172 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 MLLT6P55198 1093 aaPredicted RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 MYL6P60660 151 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 LRRC32Q14392 662 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 PON2Q15165 354 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 TDRD10Q5VZ19 366 aaKnown RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 CEP135Q66GS9 1140 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 TRIM68Q6AZZ1 485 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 CC2D1AQ6P1N0 951 aaPredicted RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 C1orf228Q6PIY5 440 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 TXNDC11Q6PKC3 985 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 SCARA5Q6ZMJ2 495 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 MON1AQ86VX9 555 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 RALGPS2Q86X27 583 aaPredicted RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 KRT222Q8N1A0 295 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 FSIP1Q8NA03 581 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 PLEKHO2Q8TD55 490 aa9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 USP13Q92995 863 aaPredicted RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 CCDC47Q96A33 483 aaKnown RBP9.11□□□□□ -0.95
SFSWAP-202ENST00000535202 TRMT2BQ96GJ1 504 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms