RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 CHRNB1P11230 501 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 KRT13P13646 458 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 PTPN1P18031 435 aaKnown RBP11.09□□□□□ -0.63
CSDE1-217ENST00000534699 DRD1P21728 446 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
CSDE1-217ENST00000534699 AFMP43652 599 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 KPNA1P52294 538 aaPredicted RBP11.09□□□□□ -0.63
CSDE1-217ENST00000534699 CC2D1AQ6P1N0 951 aaPredicted RBP11.09□□□□□ -0.63
CSDE1-217ENST00000534699 C11orf74Q86VG3 221 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 SLC46A2Q9BY10 475 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 IMPG2Q9BZV3 1241 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 XYLT2Q9H1B5 865 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 GCNT4Q9P109 453 aa11.09□□□□□ -0.63
CSDE1-217ENST00000534699 SHISA7A6NL88 538 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 SPECC1L-ADORA2AF8WAN1 911 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 PMM2O15305 246 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 TDGF1P13385 188 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 PSMC2P35998 433 aaKnown RBP11.08□□□□□ -0.64
CSDE1-217ENST00000534699 CYP2J2P51589 502 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 TDRD10Q5VZ19 366 aaKnown RBP11.08□□□□□ -0.64
CSDE1-217ENST00000534699 POTEHQ6S545 545 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 DENND5BQ6ZUT9 1274 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 TMEM150AQ86TG1 271 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 STKLD1Q8NE28 680 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 LPIN3Q9BQK8 851 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 HEBP1Q9NRV9 189 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 TMLHEQ9NVH6 421 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
CSDE1-217ENST00000534699 ZDHHC9Q9Y397 364 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 FAM92AA1XBS5 289 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 SLC16A3O15427 465 aaKnown RBP11.08□□□□□ -0.64
CSDE1-217ENST00000534699 CTHP32929 405 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 RUNX3Q13761 415 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 FRMD5Q7Z6J6 570 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 ZC3H3Q8IXZ2 948 aaKnown RBP11.08□□□□□ -0.64
CSDE1-217ENST00000534699 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 MYLPFQ96A32 169 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 SLITRK1Q96PX8 696 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 PI4K2AQ9BTU6 479 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 FOXQ1Q9C009 403 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 BLZF1Q9H2G9 400 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 TBC1D14Q9P2M4 693 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 GTF3C4Q9UKN8 822 aa11.08□□□□□ -0.64
CSDE1-217ENST00000534699 UNC80Q8N2C7 3258 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 INCA1Q0VD86 236 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 STK4Q13043 487 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 NCOA4Q13772 614 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 GRM2Q14416 872 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ZNF77Q15935 545 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ZNF699Q32M78 642 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 WDR5BQ86VZ2 330 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 NELFCDQ8IXH7 590 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 CAMKK1Q8N5S9 505 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 B3GALNT2Q8NCR0 500 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 OSCP1Q8WVF1 389 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ATRIPQ8WXE1 791 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ZNF516Q92618 1163 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 SMARCD1Q96GM5 515 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 LOXL4Q96JB6 756 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 CDK5RAP1Q96SZ6 601 aaKnown RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 MMS19Q96T76 1030 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 TSG101Q99816 390 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 IKZF4Q9H2S9 585 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 FBXO44Q9H4M3 255 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 LMAN1LQ9HAT1 526 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 CRTAC1Q9NQ79 661 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 PTPRJQ12913 1337 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 LRRIQ3A6PVS8 624 aaPredicted RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 CLIC2O15247 247 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ZNF202O95125 648 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 NFATC1O95644 943 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ASS1P00966 412 aaKnown RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 DCNP07585 359 aaKnown RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 DLATP10515 647 aaKnown RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 VIPR2P41587 438 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 CXCL12P48061 93 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 VAMP7P51809 220 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 YWHAEP62258 255 aaKnown RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 GRSF1Q12849 480 aaKnown RBP eCLIP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ERMP1Q7Z2K6 904 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 NUP93Q8N1F7 819 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 TTC9BQ8N6N2 239 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 ZSWIM2Q8NEG5 633 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 OR6B3Q8NGW1 331 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 GIPC2Q8TF65 315 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 USP13Q92995 863 aaPredicted RBP11.07□□□□□ -0.64
CSDE1-217ENST00000534699 CSNK1G1Q9HCP0 422 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
CSDE1-217ENST00000534699 A0A1B0GVL5 298 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 PRR5-ARHGAP8B1AHC4 643 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 CYP2F1P24903 491 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 IFNAR2P48551 515 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 ARHGAP8P85298 464 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 LRRC63Q05C16 580 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 WDR72Q3MJ13 1102 aa11.06□□□□□ -0.64
CSDE1-217ENST00000534699 TMEM196Q5HYL7 178 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms