RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 TFAMQ00059 246 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 DYMQ7RTS9 669 aa16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 FSIP1Q8NA03 581 aa16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 ST6GALNAC4Q9H4F1 302 aa16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 FAM13BQ9NYF5 915 aa16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 STYXL1Q9Y6J8 313 aa16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 MYO18AQ92614 2054 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-207ENST00000533523 MYMKA6NI61 221 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 TADA3O75528 432 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 ZNF806P0C7X5 589 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 ACAT1P24752 427 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 MPLP40238 635 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 LIMK1P53667 647 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 AMPD2Q01433 879 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 MTF1Q14872 753 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 PDGFRLQ15198 375 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 NFE2Q16621 373 aaPredicted RBP16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 RESP18Q5W5W9 173 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 SHC4Q6S5L8 630 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 CRELD2Q6UXH1 353 aaPredicted RBP16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 CPA6Q8N4T0 437 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 PDILTQ8N807 584 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 IQUBQ8NA54 791 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 RPLP0P6Q8NHW5 317 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 SAAL1Q96ER3 474 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 FAM213AQ9BRX8 229 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 PANK2Q9BZ23 570 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 TNMDQ9H2S6 317 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 UXTQ9UBK9 157 aaPredicted RBP16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 L1RE1Q9UN81 338 aa16.88■□□□□ 0.29
CHMP4A-207ENST00000533523 ASCC3Q8N3C0 2202 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 A0A087X0B3 334 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 CCDC163A0A0D9SF12 145 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 HUS1O60921 280 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 MBD3O95983 291 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 ITGB3P05106 788 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 CKMP06732 381 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 DRD1P21728 446 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 CMA1P23946 247 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 ADSSP30520 456 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 WNT7BP56706 349 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 AMPD3Q01432 767 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 ZNF268Q14587 947 aaPredicted RBP16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 POSTNQ15063 836 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 DDR2Q16832 855 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 CCDC142Q17RM4 750 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 STPG1Q5TH74 334 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 MON1AQ86VX9 555 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 NT5DC4Q86YG4 428 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 GPT2Q8TD30 523 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 EXOC4Q96A65 974 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 FAM84AQ96KN4 292 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 P2RY13Q9BPV8 354 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 GOLPH3LQ9H4A5 285 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 MRPL44Q9H9J2 332 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 MAGEF1Q9HAY2 307 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 DUS2Q9NX74 493 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 DDX43Q9NXZ2 648 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 TBC1D7Q9P0N9 293 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
CHMP4A-207ENST00000533523 TRAV19A0A0A6YYK7 116 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 AKAP3O75969 853 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 TOP3BO95985 862 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 PROS1P07225 676 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 IDEP14735 1019 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 CYP2F1P24903 491 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 GJA4P35212 333 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 IFNAR2P48551 515 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 RPL10AP62906 217 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 MYL7Q01449 175 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 USP4Q13107 963 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 PSMD2Q13200 908 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ALCAMQ13740 583 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ELF2Q15723 593 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 INTS6LQ5JSJ4 861 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 TCEAL6Q6IPX3 200 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ZNF720Q7Z2F6 126 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 BRSK2Q8IWQ3 736 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 C1orf127Q8N9H9 656 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ZSWIM2Q8NEG5 633 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ATP2A3Q93084 1043 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 TCEAL3Q969E4 200 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ACDQ96AP0 544 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 DNAJC19Q96DA6 116 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ECT2Q9H8V3 914 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 FBRSL1Q9HCM7 1045 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ABCB6Q9NP58 842 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 ASH1LQ9NR48 2969 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 RBAKQ9NYW8 714 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 EXOC7Q9UPT5 735 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 PCDHGA5Q9Y5G8 931 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 WNT6Q9Y6F9 365 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 MYH10P35580 1976 aa16.86■□□□□ 0.29
CHMP4A-207ENST00000533523 A0A1B0GVL5 298 aa16.85■□□□□ 0.29
CHMP4A-207ENST00000533523 FRMD3A2A2Y4 597 aa16.85■□□□□ 0.29
CHMP4A-207ENST00000533523 PPP1R37O75864 691 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms