RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	ELSPBP1	Q96BH3	223 aa		18.54	■□□□□ 0.56
CTSB-223	ENST00000532370	TNIP3	Q96KP6	325 aa		18.54	■□□□□ 0.56
CTSB-223	ENST00000532370	SLC46A2	Q9BY10	475 aa		18.54	■□□□□ 0.56
CTSB-223	ENST00000532370	CYP3A43	Q9HB55	503 aa		18.54	■□□□□ 0.56
CTSB-223	ENST00000532370	CA14	Q9ULX7	337 aa		18.54	■□□□□ 0.56
CTSB-223	ENST00000532370	COQ4	Q9Y3A0	265 aa		18.54	■□□□□ 0.56
CTSB-223	ENST00000532370	KRBA1	A5PL33	1030 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	TADA3	O75528	432 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	CCDC130	P13994	396 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	FMO5	P49326	533 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	INCA1	Q0VD86	236 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	DPCR1	Q3MIW9	517 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	VIT	Q6UXI7	678 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	UNC93A	Q86WB7	457 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	ARID3B	Q8IVW6	561 aa	Predicted RBP	18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	FUK	Q8N0W3	1084 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	CRYBG2	Q8N1P7	616 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	MLKL	Q8NB16	471 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	SPATA17	Q96L03	361 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	MYRFL	Q96LU7	910 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	LRRC3B	Q96PB8	259 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	GCNA	Q96QF7	691 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	KCNK16	Q96T55	309 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	MED10	Q9BTT4	135 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	GPR88	Q9GZN0	384 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	ELOVL4	Q9GZR5	314 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	SMG9	Q9H0W8	520 aa	Known RBP	18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	TASP1	Q9H6P5	420 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	TRPV4	Q9HBA0	871 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	SLC2A4RG	Q9NR83	387 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	FAM49B	Q9NUQ9	324 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	WNT16	Q9UBV4	365 aa		18.53	■□□□□ 0.56
CTSB-223	ENST00000532370	CILP	O75339	1184 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	PRAMEF12	O95522	483 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	NPR3	P17342	541 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	VCP	P55072	806 aa	Known RBP	18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	LRMP	Q12912	555 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	ARHGAP15	Q53QZ3	475 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	WDR44	Q5JSH3	913 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	TXNDC8	Q6A555	127 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	FAM35A	Q86V20	835 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	TRIM59	Q8IWR1	403 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	FBXL6	Q8N531	539 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	SLC2A14	Q8TDB8	520 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	TRMT2B	Q96GJ1	504 aa	Known RBP	18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	C8orf48	Q96LL4	319 aa		18.52	■□□□□ 0.56
CTSB-223	ENST00000532370	ZDBF2	Q9HCK1	2354 aa		18.52	■□□□□ 0.55
CTSB-223	ENST00000532370	HEPACAM2	A8MVW5	462 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	TRIM66	O15016	1216 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	ANXA13	P27216	316 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	ZNF394	Q53GI3	561 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	DENND5B	Q6ZUT9	1274 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	MAB21L3	Q8N8X9	362 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	NT5C1A	Q9BXI3	368 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	MFSD1	Q9H3U5	465 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	KRT82	Q9NSB4	513 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	CISH	Q9NSE2	258 aa		18.51	■□□□□ 0.55
CTSB-223	ENST00000532370	GOLGA6L22	H0YM25	854 aa		18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	BEST1	O76090	585 aa		18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	GNA14	O95837	355 aa		18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	MARS	P56192	900 aa	Known RBP	18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	IRF2BP1	Q8IU81	584 aa		18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	CREBRF	Q8IUR6	639 aa		18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	SUGP1	Q8IWZ8	645 aa	Known RBP	18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	FLCN	Q8NFG4	579 aa		18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	SMO	Q99835	787 aa		18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	TRMT61B	Q9BVS5	477 aa	Known RBP	18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	UXT	Q9UBK9	157 aa	Predicted RBP	18.5	■□□□□ 0.55
CTSB-223	ENST00000532370	PMM2	O15305	246 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	AP1G2	O75843	785 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	PSMC3	P17980	439 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	ADORA2B	P29275	332 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	KCNH2	Q12809	1159 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	IFRD2	Q12894	506 aa	Predicted RBP	18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	CUL2	Q13617	745 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	SLC44A4	Q53GD3	710 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	CWF19L1	Q69YN2	538 aa	Known RBP	18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	MON1A	Q86VX9	555 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	MFSD6L	Q8IWD5	586 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	CMTM8	Q8IZV2	173 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	ZMIZ2	Q8NF64	920 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	SCAMP5	Q8TAC9	235 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	LMO3	Q8TAP4	145 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	MRPS31	Q92665	395 aa	Known RBP	18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	SMARCD1	Q96GM5	515 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	SLC22A12	Q96S37	553 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	CYP2S1	Q96SQ9	504 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	TTLL2	Q9BWV7	592 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	TRPC7	Q9HCX4	862 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	ARHGEF3	Q9NR81	526 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	CCL26	Q9Y258	94 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	ATP8B3	O60423	1300 aa		18.49	■□□□□ 0.55
CTSB-223	ENST00000532370	C2orf78	A6NCI8	922 aa		18.48	■□□□□ 0.55
CTSB-223	ENST00000532370	PI15	O43692	258 aa		18.48	■□□□□ 0.55
CTSB-223	ENST00000532370	FGFR1OP	O95684	399 aa	Known RBP	18.48	■□□□□ 0.55
CTSB-223	ENST00000532370	CCDC192	P0DO97	292 aa		18.48	■□□□□ 0.55
CTSB-223	ENST00000532370	AVPR2	P30518	371 aa		18.48	■□□□□ 0.55
CTSB-223	ENST00000532370	GDI1	P31150	447 aa		18.48	■□□□□ 0.55
CTSB-223	ENST00000532370	RAD23B	P54727	409 aa		18.48	■□□□□ 0.55

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