RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ARHGAP6O43182 974 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 AP5Z1O43299 807 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 CBFA2T3O75081 653 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 ATP2B1P20020 1258 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 MARCKSP29966 332 aaPredicted RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 NMT1P30419 496 aaKnown RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 OPRD1P41143 372 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 AARSP49588 968 aaKnown RBP eCLIP8.93□□□□□ -0.98
CD44-232ENST00000531118 SLC14A1Q13336 389 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 KRT32Q14532 448 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 ZNF268Q14587 947 aaPredicted RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 PPP2R5AQ15172 486 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 EML3Q32P44 896 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 GALNT17Q6IS24 598 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 GLRX5Q86SX6 157 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 TMEM150AQ86TG1 271 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 SLCO6A1Q86UG4 719 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 FAM177A1Q8N128 213 aaPredicted RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 MAB21L3Q8N8X9 362 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 ZNF511Q8NB15 262 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 LSM14AQ8ND56 463 aaKnown RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 OSCP1Q8WVF1 389 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 HNRNPABQ99729 332 aaKnown RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 NAP1L4Q99733 375 aaKnown RBP8.93□□□□□ -0.98
CD44-232ENST00000531118 PRORYQ9H606 182 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 TDP1Q9NUW8 608 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 BCCIPQ9P287 314 aaKnown RBP eCLIP8.93□□□□□ -0.98
CD44-232ENST00000531118 HSFX1Q9UBD0 423 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 TMEM131Q92545 1883 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 KNL1Q8NG31 2342 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 TCRBV21S2A2A0A5A6 115 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 K7EQS6 105 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 ABLIM1O14639 778 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 TADA3O75528 432 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 DEXIO95424 95 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 KLF8O95600 359 aaPredicted RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 SYPP08247 313 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 HARSP12081 509 aaKnown RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 TYMPP19971 482 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 EFNA5P52803 228 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 RPL6Q02878 288 aaKnown RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 MGAT5BQ3V5L5 792 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 TXNDC8Q6A555 127 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 OVOS1Q6IE37 1185 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 PIK3AP1Q6ZUJ8 805 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 USP37Q86T82 979 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 MARCH9Q86YJ5 346 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 ALLCQ8N6M5 410 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 TXNDC5Q8NBS9 432 aaKnown RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 OR10T2Q8NGX3 314 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 HMGB4Q8WW32 186 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 BAP1Q92560 729 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 FCRL3Q96P31 734 aaPredicted RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 CLMPQ9H6B4 373 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 PTPRHQ9HD43 1115 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 DUS2Q9NX74 493 aaKnown RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 TOR4AQ9NXH8 423 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 PCOLCE2Q9UKZ9 415 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 KCNJ14Q9UNX9 436 aa8.92□□□□□ -0.98
CD44-232ENST00000531118 USP9XQ93008 2570 aaPredicted RBP8.92□□□□□ -0.98
CD44-232ENST00000531118 SGK1O00141 431 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 DKK1O94907 266 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 BAG4O95429 457 aaKnown RBP8.91□□□□□ -0.98
CD44-232ENST00000531118 MCF2P10911 925 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 PROZP22891 400 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 ITPKBP27987 946 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 LRPAP1P30533 357 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 HSPA4P34932 840 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 NLRP12P59046 1061 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 MRPS21P82921 87 aaKnown RBP8.91□□□□□ -0.98
CD44-232ENST00000531118 FAM160A1Q05DH4 1040 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 ZNF33AQ06730 810 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 SSRP1Q08945 709 aaKnown RBP8.91□□□□□ -0.98
CD44-232ENST00000531118 GRIK2Q13002 908 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 BYSLQ13895 437 aaKnown RBP8.91□□□□□ -0.98
CD44-232ENST00000531118 TAF12Q16514 161 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 GAB4Q2WGN9 574 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 LINC01559Q495D7 138 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 SLC39A12Q504Y0 691 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 DEFB119Q8N690 84 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 IL17RCQ8NAC3 791 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 STKLD1Q8NE28 680 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 TTC16Q8NEE8 873 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 BAHD1Q8TBE0 780 aaPredicted RBP8.91□□□□□ -0.98
CD44-232ENST00000531118 EPS8L1Q8TE68 723 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 GIPC2Q8TF65 315 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 MRPS31Q92665 395 aaKnown RBP8.91□□□□□ -0.98
CD44-232ENST00000531118 HSPA12BQ96MM6 686 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 ACAP3Q96P50 834 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 NACC1Q96RE7 527 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 ACO2Q99798 780 aaKnown RBP8.91□□□□□ -0.98
CD44-232ENST00000531118 AGXT2Q9BYV1 514 aa8.91□□□□□ -0.98
CD44-232ENST00000531118 A0A1W2PQD8 194 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 TRABD2BA6NFA1 517 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 CAPN9O14815 690 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms