RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 EDEM3Q9BZQ6 932 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 C11orf54Q9H0W9 315 aaPredicted RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 VPS16Q9H269 839 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 CXorf56Q9H5V9 222 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 ZSCAN32Q9NX65 697 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 TAS2R10Q9NYW0 307 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 CNOT7Q9UIV1 285 aaKnown RBP5.96□□□□□ -1.46
USP47-204ENST00000525078 GTF3C4Q9UKN8 822 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 CLCA2Q9UQC9 943 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 NAALADL1Q9UQQ1 740 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 TBC1D30Q9Y2I9 924 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 PLEKHM1Q9Y4G2 1056 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 LYVE1Q9Y5Y7 322 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 ACTL7AQ9Y615 435 aa5.96□□□□□ -1.46
USP47-204ENST00000525078 LOC102723971A0A1B0GUV8 181 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 ZNF839A8K0R7 811 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 EFCAB8A8MWE9 144 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 GRM6O15303 877 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 F9P00740 461 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 KRT1P04264 644 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 GJB1P08034 283 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 ANXA6P08133 673 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 NR2F1P10589 423 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 UBL4AP11441 157 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 PFKLP17858 780 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 ATP5F1P24539 256 aaPredicted RBP5.95□□□□□ -1.46
USP47-204ENST00000525078 NFKBIAP25963 317 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 SERPINA4P29622 427 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 HADHAP40939 763 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 EIF2DP41214 584 aaKnown RBP5.95□□□□□ -1.46
USP47-204ENST00000525078 PDE6CP51160 858 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 ANTXR2P58335 489 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 PSMC1P62191 440 aaKnown RBP5.95□□□□□ -1.46
USP47-204ENST00000525078 ARHGEF7Q14155 803 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 COG2Q14746 738 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 DUSP28Q4G0W2 176 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 AMOTQ4VCS5 1084 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 BMP2KLQ5H9B9 411 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 MCTP2Q6DN12 878 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 ANO7Q6IWH7 933 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 IL27RAQ6UWB1 636 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 ZDHHC24Q6UX98 284 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 BTN2A1Q7KYR7 527 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 UBE2Q1Q7Z7E8 422 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 TTC30AQ86WT1 665 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 BRSK2Q8IWQ3 736 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 SP8Q8IXZ3 490 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 NUP93Q8N1F7 819 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 Q8N3U1 123 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 FBXL6Q8N531 539 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 PPP1R14CQ8TAE6 165 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 ETNPPLQ8TBG4 499 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 IGDCC4Q8TDY8 1250 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 WDR60Q8WVS4 1066 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 WFDC12Q8WWY7 111 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 WDR92Q96MX6 357 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 UIMC1Q96RL1 719 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 G6PC3Q9BUM1 346 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 PACSIN1Q9BY11 444 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 SLC25A18Q9H1K4 315 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 NELFAQ9H3P2 528 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 BRF2Q9HAW0 419 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 DTLQ9NZJ0 730 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 SAE1Q9UBE0 346 aaPredicted RBP5.95□□□□□ -1.46
USP47-204ENST00000525078 TRPS1Q9UHF7 1281 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 DBR1Q9UK59 544 aaKnown RBP5.95□□□□□ -1.46
USP47-204ENST00000525078 ZFP37Q9Y6Q3 630 aaPredicted RBP5.95□□□□□ -1.46
USP47-204ENST00000525078 U3KQE9 123 aa5.95□□□□□ -1.46
USP47-204ENST00000525078 RUSC2Q8N2Y8 1516 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 AGAP14A8MT82 685 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 H0Y626 953 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 H7C4K7 107 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 TNPO2O14787 897 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 DHX15O43143 795 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 ADCY6O43306 1168 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 CCNT2O60583 730 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 GUCY1B2O75343 617 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 PGM3O95394 542 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 VIPP01282 170 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 AFPP02771 609 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 TFRCP02786 760 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 THEGLP0DJG4 465 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 IL2RBP14784 551 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 FPR1P21462 350 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 COL8A1P27658 744 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 NOS3P29474 1203 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 GCH1P30793 250 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 CYP4F8P98187 520 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 CD83Q01151 205 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 PDCLQ13371 301 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 TDGQ13569 410 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 KCNAB1Q14722 419 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 PKN2Q16513 984 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 SKIDA1Q1XH10 827 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 PABPC1LQ4VXU2 614 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 TTC22Q5TAA0 569 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 VASNQ6EMK4 673 aa5.94□□□□□ -1.46
USP47-204ENST00000525078 SHQ1Q6PI26 577 aaKnown RBP5.94□□□□□ -1.46
USP47-204ENST00000525078 CPLX2Q6PUV4 134 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms