RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 TSPY1Q01534 308 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 PUM1Q14671 1186 aaKnown RBP eCLIP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 FAM171BQ6P995 826 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 STXBP4Q6ZWJ1 553 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 EPM2AIP1Q7L775 607 aaPredicted RBP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 ADGRF2Q8IZF7 708 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 CELF5Q8N6W0 485 aaKnown RBP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 LRRC52Q8N7C0 313 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 NOC3LQ8WTT2 800 aaKnown RBP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 GSDMAQ96QA5 445 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 SLC22A12Q96S37 553 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 EBF3Q9H4W6 596 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 FBRSL1Q9HCM7 1045 aaKnown RBP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 INTS13Q9NVM9 706 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 ITGA11Q9UKX5 1188 aa10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 MAGED2Q9UNF1 606 aaPredicted RBP10.34□□□□□ -0.75
CNKSR1-209ENST00000524529 GON4LQ3T8J9 2241 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 HUS1O60921 280 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 CST3P01034 146 aaPredicted RBP10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 KRT19P08727 400 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 TMEM191BP0C7N4 346 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 RBP5P82980 135 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 ZXDBP98169 803 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 DPYDQ12882 1025 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 RUNX3Q13761 415 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 LRRC32Q14392 662 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 KCNB1Q14721 858 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 NFE2Q16621 373 aaPredicted RBP10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 FAM26FQ5R3K3 315 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 HEATR6Q6AI08 1181 aaKnown RBP10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 FSTL4Q6MZW2 842 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 DGLUCYQ7Z3D6 616 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 MON1AQ86VX9 555 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 TMEM86AQ8N2M4 240 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 TOP6BLQ8N6T0 577 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 ZNF507Q8TCN5 953 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 CACTINQ8WUQ7 758 aaKnown RBP10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 EZH1Q92800 747 aaPredicted RBP10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 MYRFLQ96LU7 910 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 GCNAQ96QF7 691 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 CYP2S1Q96SQ9 504 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 TMEM206Q9H813 350 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 CRTAC1Q9NQ79 661 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 RMND1Q9NWS8 449 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 HSPBP1Q9NZL4 362 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 NUP205Q92621 2012 aa10.33□□□□□ -0.76
CNKSR1-209ENST00000524529 C2orf78A6NCI8 922 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 ANTXRLA6NF34 631 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 ZNF233A6NK53 670 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 KIF20AO95235 890 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 EGFP01133 1207 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 RPN1P04843 607 aaKnown RBP10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 ATXN1P54253 815 aaKnown RBP10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 NRLP54845 237 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 USP46P62068 366 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 PSMC1P62191 440 aaKnown RBP10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 MYL7Q01449 175 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 SPEM2Q0P670 501 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 ZNF77Q15935 545 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 TAF12Q16514 161 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 ITPRIPL2Q3MIP1 535 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 CFAP221Q4G0U5 840 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 TMEM196Q5HYL7 178 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 DGKKQ5KSL6 1271 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 C1orf228Q6PIY5 440 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 KIAA0895Q8NCT3 520 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 SPATA20Q8TB22 786 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 SPATA18Q8TC71 538 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 SCFD1Q8WVM8 642 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 ZNF516Q92618 1163 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 SMARCE1Q969G3 411 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 TRMT2BQ96GJ1 504 aaKnown RBP10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 ANKRD36BP1Q96IX9 119 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 SYT15Q9BQS2 421 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 MRPL45Q9BRJ2 306 aaKnown RBP10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 AGPAT3Q9NRZ7 376 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 TDP1Q9NUW8 608 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 EXOC1Q9NV70 894 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 TMEM30AQ9NV96 361 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 GCNT4Q9P109 453 aa10.32□□□□□ -0.76
CNKSR1-209ENST00000524529 TRDMT1O14717 391 aaKnown RBP10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 KIAA0391O15091 583 aaKnown RBP10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 CLIC2O15247 247 aa10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 EIF3DO15371 548 aaKnown RBP eCLIP10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 DDX6P26196 483 aaKnown RBP eCLIP10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 HOXA6P31267 233 aa10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 AVPR1AP37288 418 aa10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 LHX1P48742 406 aa10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 PXNP49023 591 aaPredicted RBP10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 SNRPFP62306 86 aaKnown RBP10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 RPL10AP62906 217 aaKnown RBP10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 USP4Q13107 963 aa10.31□□□□□ -0.76
CNKSR1-209ENST00000524529 PNOCQ13519 176 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms