RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SOCS4Q8WXH5 440 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 ALG3Q92685 438 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 PI4K2AQ9BTU6 479 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 INO80BQ9C086 356 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 XYLT2Q9H1B5 865 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 R3HDMLQ9H3Y0 253 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 RNPEPQ9H4A4 650 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 GOLPH3Q9H4A6 298 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 TUT1Q9H6E5 874 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 RPF1Q9H9Y2 349 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 RRAGCQ9HB90 399 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 IFT122Q9HBG6 1241 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 PDGFCQ9NRA1 345 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 PARVAQ9NVD7 372 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 WDR35Q9P2L0 1181 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 STARD13Q9Y3M8 1113 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 PCDHB4Q9Y5E5 795 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 KCNMB2Q9Y691 235 aa7.11□□□□□ -1.27
CTNNA1-228ENST00000521640 MROH7Q68CQ1 1323 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 NRCAMQ92823 1304 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 A0A1B0GUA9 196 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 SMIM35A0A1B0GVV1 85 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 TCRBV5S1A1TA0A578 114 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 MBLAC1A4D2B0 266 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 MYO1FO00160 1098 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 NDC80O14777 642 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 THAP12O43422 761 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ERLIN2O94905 339 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 SYF2O95926 243 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 IGHA2P01877 340 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 WEE2P0C1S8 567 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 EPB42P16452 691 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 TARSP26639 723 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ECHS1P30084 290 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 AXLP30530 894 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 POLR2BP30876 1174 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 CYP2C19P33261 490 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 PTPN7P35236 360 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 TNFSF9P41273 254 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ASPAP45381 313 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 CARSP49589 748 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 DGKGP49619 791 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 CLCN3P51790 818 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 INHBEP58166 350 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 SLC7A5Q01650 507 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 DR1Q01658 176 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ACVR2BQ13705 512 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 MESDQ14696 234 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 STILQ15468 1287 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ZNF699Q32M78 642 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 NAA35Q5VZE5 725 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 MAP1SQ66K74 1059 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 OLFML2BQ68BL8 750 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 DUPD1Q68J44 220 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 TMEM270Q6UE05 265 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 LINC00114Q6XXX2 140 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 DPP9Q86TI2 863 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ATCAYQ86WG3 371 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 SLC13A5Q86YT5 568 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 RHOT1Q8IXI2 618 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 KLHL7Q8IXQ5 586 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 KATNAL2Q8IYT4 538 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 IQCKQ8N0W5 287 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 GRK7Q8WTQ7 553 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 AFG1LQ8WV93 481 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ZNF606Q8WXB4 792 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 CASKIN2Q8WXE0 1202 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 COPS5Q92905 334 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 SCARF2Q96GP6 870 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 NLRP4Q96MN2 994 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 RUFY1Q96T51 708 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ADPGKQ9BRR6 497 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ERP44Q9BS26 406 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 MTMR12Q9C0I1 747 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 MIS12Q9H081 205 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 TSPYL1Q9H0U9 437 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 PDZD7Q9H5P4 517 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 LRRC19Q9H756 370 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 CISHQ9NSE2 258 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 SMARCAL1Q9NZC9 954 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ADAM22Q9P0K1 906 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 IP6K2Q9UHH9 426 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 FEZ2Q9UHY8 353 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ANAPC7Q9UJX3 599 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 ITGA11Q9UKX5 1188 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 KIAA1257Q9ULG3 409 aa7.1□□□□□ -1.27
CTNNA1-228ENST00000521640 UMODL1Q5DID0 1318 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 SRRM3A6NNA2 597 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 AGPSO00116 658 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 TSPAN1O60635 241 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 KPNA6O60684 536 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 RPS6KA5O75582 802 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 STAG3L1P0CL83 205 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 RRM1P23921 792 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 ADH7P40394 386 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 CETN2P41208 172 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 ADCYAP1R1P41586 468 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 DNA2P51530 1060 aa7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 EIF3BP55884 814 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-228ENST00000521640 MYL6P60660 151 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms