RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, human

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD1-208	ENST00000520561	PRSS55	Q6UWB4	352 aa	Predicted RBP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	TAS1R1	Q7RTX1	841 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	DNAAF5	Q86Y56	855 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	REXO1L1P	Q8IX06	675 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	GPR65	Q8IYL9	337 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	VPS52	Q8N1B4	723 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	KLHL23	Q8NBE8	558 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	C2orf15	Q8WU43	125 aa	Known RBP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	VCPIP1	Q96JH7	1222 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	ALS2CR12	Q96Q35	445 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	C11orf84	Q9BUA3	381 aa	Predicted RBP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	VN1R3	Q9BXE9	311 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	DUSP16	Q9BY84	665 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	ZBP1	Q9H171	429 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	DMAP1	Q9NPF5	467 aa	Predicted RBP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	AVEN	Q9NQS1	362 aa	Predicted RBP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	CHST7	Q9NS84	486 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	ABI2	Q9NYB9	513 aa	Predicted RBP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	WDR35	Q9P2L0	1181 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	MYO1A	Q9UBC5	1043 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	TRIM10	Q9UDY6	481 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	CNOT8	Q9UFF9	292 aa	Known RBP	9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	MSRA	Q9UJ68	235 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	GUCA1B	Q9UMX6	200 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	TFR2	Q9UP52	801 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	LZTS1	Q9Y250	596 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	PCDHB5	Q9Y5E4	795 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	CDY1	Q9Y6F8	540 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	NLRC5	Q86WI3	1866 aa		9.46	□□□□□ -0.9
CSMD1-208	ENST00000520561	DNAH12	Q6ZR08	3092 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561		A0A0U1RQJ8	604 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	MACROD2	A1Z1Q3	448 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	MTMR11	A4FU01	709 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	GRXCR1	A8MXD5	290 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	KIF2A	O00139	706 aa	Predicted RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	TRIM66	O15016	1216 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ATMIN	O43313	823 aa	Predicted RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	LPXN	O60711	386 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	RB1	P06400	928 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CA3	P07451	260 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CTSA	P10619	480 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	BDNF	P23560	247 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ARHGAP25	P42331	645 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	NOP2	P46087	812 aa	Known RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	PLA2G4A	P47712	749 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	RGS7	P49802	495 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	MAP3K7CL	P57077	242 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ROR1	Q01973	937 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	UBE3A	Q05086	875 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	GPR17	Q13304	367 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CFAP221	Q4G0U5	840 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	FAM109B	Q6ICB4	259 aa	Predicted RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	DNAJC24	Q6P3W2	148 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	VSTM1	Q6UX27	236 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CLEC20A	Q6ZU45	233 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	PAQR9	Q6ZVX9	377 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	LRRTM3	Q86VH5	581 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	SIX6OS1	Q8N1H7	587 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	FBXO22	Q8NEZ5	403 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ZNF564	Q8TBZ8	553 aa	Predicted RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	SPPL2B	Q8TCT7	592 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	STK32A	Q8WU08	396 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ATRIP	Q8WXE1	791 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	C18orf8	Q96DM3	657 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ARHGEF26	Q96DR7	871 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CALR3	Q96L12	384 aa	Known RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	HSFY1	Q96LI6	401 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	C16orf45	Q96MC5	204 aa	Predicted RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	PGLYRP2	Q96PD5	576 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	TGS1	Q96RS0	853 aa	Known RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CPXM1	Q96SM3	734 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	SELENOO	Q9BVL4	669 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	LACRT	Q9GZZ8	138 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	LRRC4	Q9HBW1	653 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	MRPL47	Q9HD33	250 aa	Known RBP	9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ABCB6	Q9NP58	842 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	PNPLA8	Q9NP80	782 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CYLD	Q9NQC7	956 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ENTPD7	Q9NQZ7	604 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	TMLHE	Q9NVH6	421 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	CTTNBP2NL	Q9P2B4	639 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	UVRAG	Q9P2Y5	699 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	MTUS1	Q9ULD2	1270 aa		9.45	□□□□□ -0.9
CSMD1-208	ENST00000520561	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561		E5RJQ4	531 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	C5orf67	F2Z3F1	127 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	GOLGA8S	H3BPF8	625 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	TULP2	O00295	520 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	ZNF500	O60304	480 aa	Predicted RBP	9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	TBC1D4	O60343	1298 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	ERBB2	P04626	1255 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	CYP1A2	P05177	515 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	MYOG	P15173	224 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	RPL17	P18621	184 aa	Known RBP	9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	RRM1	P23921	792 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	BMP8B	P34820	402 aa		9.44	□□□□□ -0.9
CSMD1-208	ENST00000520561	OR1D2	P34982	312 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms